Protein Model on 3ly5_B_1_G_1 (TEMPLATE: 3ly5 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(DDX1_HUMAN) B 1 (B) polymer(polypeptide(L)) [213 aa] ATP-dependent RNA helicase DDX18 :DDX18_HUMAN
2 b G 1 (B) non-polymer(SCN) THIOCYANATE ION 346T 348G 349R 380Y(F) (identity: 75.0 %/38.5 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:3ly5_B_1 identity=38.5%
queryA        15:QAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSR: 114
                : *  **     * **  **   * * * * ** ****** ** **                                                       :
3ly5_B_1      67:KAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELI--------------------------------------------------: 116
SecStr          :HHHHTTT  B  HHHHHHHHHHHHT   EE   TTSSHHHHHHHHHHHHH--------------------------------------------------:    
ExpBur          :ebbeeeeeeebeebbeebbbebeeeebbebbbeeeeebbbbbbbbbbbbb--------------------------------------------------:    

queryA       115:EVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGL: 214
                :                                                                                                    :
3ly5_B_1      -1:----------------------------------------------------------------------------------------------------:  -1
SecStr          :----------------------------------------------------------------------------------------------------:    
ExpBur          :----------------------------------------------------------------------------------------------------:    

queryA       215:AFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYI: 313
                :                                                                   * * *    **  * **** **    *      :
3ly5_B_1     116:--------------------------------------------------------------IVKLRFMPRNGTGVLILSPTRELAMQTFGVLKELMTHH: 153
SecStr          :--------------------------------------------------------------HHHTT  TTT   EEEE SSHHHHHHHHHHHHHHTTT :    
ExpBur          :--------------------------------------------------------------bbeeebbeeebbbbbbbbbbeebbeebeeebbebbeeb:    

queryA       314:DNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSAT: 409
                :        ** **         * **  * * **** **    *          ** ****  *  *            *       * *    ***:
3ly5_B_1     154:VHTYG---LIMGGSNRSAEAQKLGNGINIIVATPGRLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLP------TRRQTMLFSAT: 241
SecStr          :   EE---EE SSS HHHHHHHHHT  SEEEE HHHHHHHHHH TT   TT  EEEE SHHHHHHTT HHHHHHHHHHS ------SSSEEEEE SS:    
ExpBur          :ebeeb---ebbeeeeeeebeebbeebbbbbbbbbebbbebbeebeebeeeebebbbbbbbbebbeeeeeeebebbbeebe------eebbbbbbbee:    
Contact         :                                b bb                               b                                


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