[pdbjlvh2]Protein Model on 3iuy_B_1_F

Protein Model on 3iuy_B_1_F_1 (TEMPLATE: 3iuy )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(DDX1_HUMAN)	B 1 (B)	polymer(polypeptide(L)) [206 aa]	Probable ATP-dependent RNA helicase DDX53 :DDX53_HUMAN
2	b		F 1 (B)	non-polymer(CL)	CHLORIDE ION	362S(R) (identity: 0.0 %/35.1 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:3iuy_B_1 identity=35.1%

queryA        11:PEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLC: 110
                :*           * ** **    * ** * *    * ** ***     *                                                   :
3iuy_B_1      29:PDLLKSIIRVGILKPTPIQSQAWPIILQGIDLIVVAQTGTGKTLSYLMP---------------------------------------------------:  77
SecStr          :HHHHHHHHHHT  S  HHHHHHHHHHHTT  EEEE  TTS HHHHHHHH---------------------------------------------------:    
ExpBur          :eebeebbeeeeeeebeebbbbbbbbbeeebbbbbbbeeeeebbbbbbbb---------------------------------------------------:    

queryA       111:CQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGK: 210
                :                                                                                                    :
3iuy_B_1      -1:----------------------------------------------------------------------------------------------------:  -1
SecStr          :----------------------------------------------------------------------------------------------------:    
ExpBur          :----------------------------------------------------------------------------------------------------:    

queryA       211:DLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLP---------------NAPKALIVEPS: 295
                :                                                                                         * *  *   * :
3iuy_B_1      78:--------------------------------------------------------------------------GFIHLDSXXXXXXXXNGPGMLVLTPT: 103
SecStr          :--------------------------------------------------------------------------HHHHHT --------   SEEEE SS:    
ExpBur          :--------------------------------------------------------------------------bbbeeee--------eebbbbbbbbb:    

queryA       296:RELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRM: 387
                :****   *       **     *    *               ****   ***** **      **     ** ****  *       *   :
3iuy_B_1     104:RELA---LHVEAECSKY-SYKGLKSICIYXXXXXXXXXXXXXXGVDIIIATPGRLNDLQMNNSVNLRSITYLVIDEADKMLDMEFEPQIRKI: 191
SecStr          :HHHH---HHHHHHHHHH-  TT  EEEE --------------  SEEEE HHHHHHHHHTT S  TT  EEEE  HHHHHHTT HHHHHHH:    
ExpBur          :eebb---eebbeebeeb-ebeebebeebe--------------eeebbbbbbeebbeebeeeebebeebebbbbbbbbebbeeebeeebeeb:    
Contact         :                                                                  b

Protein Model on 3iuy_B_1_F_1 (TEMPLATE: 3iuy )

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