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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(DDX1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [213 aa] | Probable ATP-dependent RNA helicase DDX53 :DDX53_HUMAN | |
2 | b | C 1 (A) | non-polymer(AMP) | ADENOSINE MONOPHOSPHATE | 22W(I) 24L(K) 25P 26T 29Q 48T 49G 50S(T) 51G 52K 53T 54G(L) 304N(H) 308Q(E) (identity: 57.1 %/36.5 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:3iuy_A_1 identity=36.5% |
queryA 11:PEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLC: 110 :* * ** ** * ** * * * ** *** * : 3iuy_A_1 29:PDLLKSIIRVGILKPTPIQSQAWPIILQGIDLIVVAQTGTGKTLSYLMP---------------------------------------------------: 77 SecStr :HHHHHHHHHHT S HHHHHHHHHHHTT EEEE TTS HHHHHHHH---------------------------------------------------: ExpBur :eebbebbeeeeeeebeebbbbbbbbbeeebbbbbbbeeeeebbbbbbbb---------------------------------------------------: Contact : b bbb b bbbbbbb queryA 111:CQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGK: 210 : : 3iuy_A_1 -1:----------------------------------------------------------------------------------------------------: -1 SecStr :----------------------------------------------------------------------------------------------------: ExpBur :----------------------------------------------------------------------------------------------------: queryA 211:DLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLP---------------NAPKALIVEPS: 295 : * * * * : 3iuy_A_1 78:--------------------------------------------------------------------------GFIHLDXXXXXXXXXNGPGMLVLTPT: 103 SecStr :--------------------------------------------------------------------------HHHHH --------- SEEEE SS: ExpBur :--------------------------------------------------------------------------bbbeee---------eebbbbbbbbe: queryA 296:RELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRM: 387 :**** * ** * * * * **** ***** ** ** ** **** * * : 3iuy_A_1 104:RELA---LHVEAECSKY-SYKGLKSICIYGXXXXXXQIEDISKGVDIIIATPGRLNDLQMNNSVNLRSITYLVIDEADKMLDMEFEPQIRKI: 191 SecStr :HHHH---HHHHHHHHHH- TT EEEE ------ HHHHHS SEEEE HHHHHHHHHTT TT EEEE HHHHHHTT HHHHHHH: ExpBur :eebb---eebbeebeeb-ebeebeebbbee------eeeebebebebbbbbbeebbebeeeeebebeebbbbbbbebbbbeeeebbeebeeb: Contact : b b |