Protein Model on 3fht_A_1_C_1
(TEMPLATE: 
3fht
)Protein Model on 3fht_A_1_C_1
(TEMPLATE: 3fht
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(DDX1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [392 aa] | ATP-dependent RNA helicase DDX19B :DD19B_HUMAN | |
| 2 | b | C 1 (C) | polymer(polyribonucleotide) | RNA (5'-R(*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3') | 294P 295S(T) 296R(Y) 325G(R) 328A(K) 329A(L) 346T 348G 349R(T) 352D 356T(K) 357G(L) 380Y(H) 383F(Q) 514R(H) 515T 516K(R) 546H(S) 547G 554R 572T 573D(N) 574V 596K (identity: 41.7 %/35.0 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:3fht_A_1 identity=35.0% |
queryA 256:VALSKAPDGYIVKSQHSGN--------AQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP: 347
: * * * ** ** * * * * * *** ** * * * * * * * ** ***:
3fht_A_1 58:LMLAEPPQNLIAQSQ-SGTGKTAAFVLAMLSQVEPANKYPQCLCLSPTYELALQTGKVIEQMGKFY--PELKLAYAVRGNKLERGQKISEQ---IVIGTP: 151
SecStr :HHHSSS EEEE -TTS HHHHHHHHHHHH TTS S EEEE SSHHHHHHHHHHHHHHTTTS--TT EEEE TT TT S---EEEE H:
ExpBur :ebeeeeeebbbbbbb-bbbebebbbbbbbbbbbeeeeeebbbbbbbbbbbbbebbbeebeebbeeb--eebebbbbbeeeeeeeeeebeeb---bbbbbb:
Contact : bbb b bb b
queryA 348:GRLDDLVSTGK-LNLSQVRFLVLDEADGLL-SQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV: 445
:* * * * ****** ** * * * * *** * * * * ** * ** :
3fht_A_1 152:GTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLP------RNCQMLLFSATFED-SVWKFAQKVVPDPNVIKLKREEETLDTIKQYY: 244
SecStr :HHHHHHHTTS SS GGG EEEEETHHHHHSTTTTHHHHHHHHHTS ------TT EEEEEES H-HHHHHHHHHSSS EEE GGGSS TTEEEEE:
ExpBur :ebbbebbeeeebbebeebebbbbbbbbebbbeeeebeebbebbeebe------eebbbbbbbbbbee-ebbeebeebbeeeeeeebeeeebbbeebebeb:
Contact :bb b bb b b b
queryA 446:VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCL: 545
:* * * * ** *** * * * *** *:
3fht_A_1 245:VLCSSRDEKF-------------------------------QALCNLYGAITI--------AQAMIFCHTRKTASWL-------AAELSKEGHQVAL--L: 296
SecStr :EE SSHHHHH-------------------------------HHHHHHHHHHSS--------SEEEEE SSHHHHHHH-------HHHHHHTT EE--E:
ExpBur :bebeeeeebb-------------------------------ebbeebbeebee--------ebbbbbbeeeebbeeb-------beebeeeeeebbe--b:
Contact : bbb
queryA 546:HGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEK------QNYVHRIGRVGRAERMGLAISLV: 619
: * * *** * * * * ***** * *** ** * * ***** ** *** *:
3fht_A_1 297:SGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMV: 376
SecStr : TTS HHHHHHHHHHHHTTS SEEEE GGGTSS TTEEEEEESS B SSSSB HHHHHHHHTTSS TT EEEEEEE:
ExpBur :beebebeebeebbeebeeeebebbbbbebbbbbbebeebebbbbbbbbbbeeeebbbbbbbbbbbbbbbebeebebbbbb:
Contact :bb b bbb b
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[assembly_id:1]
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