[pdbjlvh2]Protein Model on 3fe2_A_1_C

Protein Model on 3fe2_A_1_C_1 (TEMPLATE: 3fe2 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(DDX1_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [234 aa]	Probable ATP-dependent RNA helicase DDX5 :DDX5_HUMAN
2	b		C 1 (A)	non-polymer(SO4)	SULFATE ION	325G 346T 347P 348G 349R 380Y(F) (identity: 83.3 %/37.1 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:3fe2_A_1 identity=37.1%

queryA         4:FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA: 103
                :* *                  ** ***   *  * * *    * ******     * *                                          :
3fe2_A_1      31:FYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAI------------------------------------------:  88
SecStr          :TTTTT  HHHHHHHHTTT  S  HHHHHHHHHHHHT  EEEEE TTS HHHHHHHHHH------------------------------------------:    
ExpBur          :beebebeeebeebbeeeeeeebebbbbbbbbbbeeeebbbbbbeeebebebbbbbbbb------------------------------------------:    

queryA       104:IGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHV: 203
                :                                                                                                    :
3fe2_A_1      -1:----------------------------------------------------------------------------------------------------:  -1
SecStr          :----------------------------------------------------------------------------------------------------:    
ExpBur          :----------------------------------------------------------------------------------------------------:    

queryA       204:KFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLP------------NAPKALI: 291
                :                                                                                               *  * :
3fe2_A_1      89:---------------------------------------------------------------------------------VHINHQPFLERGDGPICLV: 107
SecStr          :---------------------------------------------------------------------------------HHHHTS    TT   SEEE:    
ExpBur          :---------------------------------------------------------------------------------bbbeeeeebeeeebbbbbb:    

queryA       292:VEPSRELAEQTLNNIKQFK-KYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQ: 390
                :  * **** *      *    *     *    * **     *   ** ** *   ***** *    ** **     *******  *  *    *     *:
3fe2_A_1     108:LAPTRELAQQ----VQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQ: 203
SecStr          :E SSHHHHHH----HHHHHHHHHHHTT  EEEE TTS HHHHHHHHHH  SEEEE HHHHHHHHHHTS   TT  EEEETTHHHHHHTT HHHHHHHHTT:    
ExpBur          :bbbbeebbee----beeebeebbeebebebbbbbeeeeeeebbeebeebbbbbbbbbebbbebbeeeebbbebbbbbbbbbbbebbeeebeeebeebbee:    
Contact         :                                  b                    bbbb                              b          

queryA       391:IPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIM: 423
                :*          *    ***     *  * *   :
3fe2_A_1     204:I------RPDRQTLMWSATWPK-EVRQLAEDFL: 229
SecStr          :S------ SS EEEEEES   H-HHHHHHHHH :    
ExpBur          :b------eeebbbbbbbeeeee-ebeebbeebb:

Protein Model on 3fe2_A_1_C_1 (TEMPLATE: 3fe2 )

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