[pdbjlvh2]Protein Model on 1vec_B_2_D

Protein Model on 1vec_B_2_D_2 (TEMPLATE: 1vec )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:3]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(DDX1_HUMAN)	B 2 (B)	polymer(polypeptide(L)) [206 aa]	ATP-dependent RNA helicase p54 :DDX6_HUMAN
2	b		D 2 (B)	non-polymer(TLA)	L(+)-TARTARIC ACID	296R 324I(T) 325G 346T 348G 349R (identity: 83.3 %/39.3 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:1vec_B_2 identity=39.3%

queryA         4:FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA: 103
                :*       *      ** *  *  ** ****  * * * *  *  * ** **  **                                            :
1vec_B_2       5:FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLE-----------------------------------------:  63
SecStr          :GGGS   HHHHHHHHHHT  S  HHHHTTHHHHHHT  EEEE  SSSTTHHHHHHHHHH-----------------------------------------:    
ExpBur          :beebebeeebbebbeeeeeeebeebbeebbeebbeeebbbbebeeeeebbbbbbbbbbb-----------------------------------------:    

queryA       104:IGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHV: 203
                :                                                                                                    :
1vec_B_2      -1:----------------------------------------------------------------------------------------------------:  -1
SecStr          :----------------------------------------------------------------------------------------------------:    
ExpBur          :----------------------------------------------------------------------------------------------------:    

queryA       204:KFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP---------KALIVEP: 294
                :                                                                                              *    *:
1vec_B_2      64:------------------------------------------------------------------------------------RLDLKKDNIQAMVIVP:  79
SecStr          :------------------------------------------------------------------------------------H  TTS S  EEEE S:    
ExpBur          :------------------------------------------------------------------------------------ebeeeeeebbbbbbbb:    

queryA       295:SRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQV: 394
                : **** *      *  *     *       **   **    *   *  *  ****  **   *      *   ****** ****   **   *   *   :
1vec_B_2      80:TRELALQVSQICIQVSKHMGGAKV--MATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQ---DFVQIMEDIILTL: 174
SecStr          :SHHHHHHHHHHHHHHTGGGS   E--EEE TTS HHHHHHHHTS   EEEE HHHHHHHHHTTSS  TT  EEEEESHHHHTST---TTHHHHHHHHHTS:    
ExpBur          :eeebbeebbebbeebbeebeebeb--bebbeeeeeeebeeebeeebbbbbbbbebbbebbeeebbebeebebbbbbbbbebbee---eeeeebeebbeeb:    
Contact         : b                           bb                    b bb                                             

queryA       395:TSDGKRLQVIVCSAT: 409
                :    *  *    ***:
1vec_B_2     175:P---KNRQILLYSAT: 186
SecStr          : ---TT EEEEEES :    
ExpBur          :e---eebbbbbbbee:

Protein Model on 1vec_B_2_D_2 (TEMPLATE: 1vec )

Input Residue Numbers for Focused Sites