Protein Model on 6x5l_A_1_F_1 (TEMPLATE: 6x5l )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(TMPS2_HUMAN) A 1 (A) polymer(polypeptide(L)) [233 aa] Coagulation factor IX :FA9_HUMAN
2 b F 1 (A) non-polymer(CIT) CITRIC ACID 430L(H) 468A(K) (identity: 0.0 %/40.0 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6x5l_A_1 identity=40.0%
queryA       256:IVGGESALPGAWPWQVSLHVQNVHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILR-QSFMFYGAGYQVEKVISHPNYDSKTK--NNDIALMKLQ: 352
                : **** * **  **** *       *****    **********         *  **               *   * * **       * ****  * :
6x5l_A_1       1:VVGGEDAKPGQFPWQVVLNGKVDAFCGGSIVNEKWIVTAAHCVEXGVK----ITVVAGEHNIEETEHTEQKRNVIRIIPHHNYNAAINKYNHDIALLELD:  96
SecStr          : BS EE  TTSSTTEEEEESSSTTSEEEEEEETTEEEE GGG  -   ---- EEEES SBTTS  S  EEEEEEEEEE TT  TTT TTTT  EEEEES:    
ExpBur          :bbeeeebeeeebbbbbbbbeeeebbbbbbbbbebbbbbbbbbbe-eee----bebbbbbbbeeeeeeeebeeebeeebebeebeeeeeeeebbbbbbbbe:    

queryA       353:KPLTFNDLVKPVCLPNPGM--MLQPEQLCWISGWGATEEKGKTSEVLNAAKVLLIETQRC--NSRY-VYDNLITPAMICAGFLQGNVDSCQGDSGGPLVT: 447
                : **  *  * * *                  ****    **    **    * *     *        * *     * ****  *  ********** **:
6x5l_A_1      97:EPLVLNSYVTPICIADKEYTNIFLKFGSGYVSGWGRVFHKGRSALVLQYLRVPLVDRATCLRSTKFTIYNN-----MFCAGFHEGGRDSCQGDSGGPHVT: 191
SecStr          :S    SSSS   B   HHHHHHHHHT EEEEEESSBSSTT  B SB EEEEEEEE HHHHHHT SS   TT-----EEEES TT S B  TT TT EEEE:    
ExpBur          :eebeeeeebeebebbeeeebeebbeeeebebbbbbeeeeeeebbeebbbbebeebeeebbeebbeeebeee-----bbbbbbeebeebbbebbbbbbbbb:    
Contact         :                                                                                  b                 

queryA       448:SKNNIWWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMR: 489
                :       * *  ***  **     * *  *     **     :
6x5l_A_1     192:EVEGTSFLTGIISWGEECAMKGKYGIYTKVSRYVNWIKEKTK: 233
SecStr          :EETTEEEEEEEEEE SSSS TT  EEEEEGGGTHHHHHHHH :    
ExpBur          :eeeeebbbbbbbbbeeebbeeeebbbbbebbebbebbeeebe:    
Contact         :                    b                                                                               


Input Residue Numbers for Focused Sites

ex) 2,15,123