Protein Model on 6vvu_D_1_S_1 (TEMPLATE: 6vvu )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(TMPS2_HUMAN) D 1 (C) polymer(polypeptide(L)) [242 aa] Tryptase alpha/beta-1 :TRYB1_HUMAN
2 b S 1 (C) non-polymer(0GJ) L-alpha-glutamyl-N-{(1S)-4-{[amino(iminio)methyl]amino}-1-[(1S)-2-chloro-1-hydroxyethyl]butyl}glycinamide 296H 341T(Q) 435D 436S 437C 438Q 439G 441S 459T(V) 460S 461W 462G 464G 472G (identity: 85.7 %/40.3 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6vvu_D_1 identity=40.3%
queryA       256:IVGGESALPGAWPWQVSLHVQN---VHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFY-GAGYQVEKVISHPNYDSKTKNNDIALMKL: 351
                :****  *    ******* *      * **** * * *  ******           *    **     *      *   * **         ****  *:
6vvu_D_1      31:IVGGQEAPRSKWPWQVSLRVHGPYWMHFCGGSLIHPQWVLTAAHCVGPDVKD---LAALRVQLREQHLYYQDQLLPVSRIIVHPQFYTAQIGADIALLEL: 127
SecStr          : BS EE  SSS TTEEEEEE SSS EEEEEEEEEETTEEEE HHHH SS   ---GGGEEEE S SBTTTS   EEEEEEEE TT S TTTS   EEEEE:    
ExpBur          :bbeeeebeeeebbbbbbbbeeeeeeebebbbbbbeeebbbbbbebbbeeeee---eebbebbbbebebeeeeeebebeeebebeebeebeebbbbbbbeb:    
Contact         :                                           b                                             b          

queryA       352:QKPLTFNDLVKPVCLPNPGMMLQPEQLCWISGWGATE--EKGKTSEVLNAAKVLLIETQRCNSRYVYD-------NLITPAMICAGFLQGNVDSCQGDSG: 442
                :  *      *  * **       *   **  ***     *       *   **   *   *   *                * ***      ********:
6vvu_D_1     128:EEPVNVSSHVHTVTLPPASETFPPGMPCWVTGWGDVDNDERLPPPFPLKQVKVPIMENHICDAKYHLGAYTGDDVRIVRDDMLCAG--NTRRDSCQGDSG: 225
SecStr          :SS     SSS   B   TT    TT  EEEEESS SBTTB   TT B EEEEE EE HHHHHHHHHTT  S TTS SS TTEEEE -- SSSB  TT TT:    
ExpBur          :eeebeeeeebeebebbeeeeebeeebebbbbbbbbbeeeeebeeeebbbbbebebeebeebbeebbeeeeeeeeeebbeebbbbbb--eeeebbbeebbb:    
Contact         :                                                                                            bbbbb b 

queryA       443:GPLVTSKNNIWWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYR: 486
                :****   *  *   *  *** ***   *** *  *    ***  :
6vvu_D_1     226:GPLVCKVNGTWLQAGVVSWGEGCAQPNRPGIYTRVTYYLDWIHH: 269
SecStr          : EEEEEETTEEEEEEEEEE SSSSBTTB EEEEEGGGGHHHHHH:    
ExpBur          :bbbbbebeeeebbbbbbbbeeebbeeebbbbbbbbbebbebbee:    
Contact         :                bbbb b       b                                                                      


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