Protein Model on 6hhc_C_1_A_1 (TEMPLATE: 6hhc )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(TMPS2_HUMAN) C 1 (A) polymer(polypeptide(L)) [229 aa] Coagulation factor XI :FA11_HUMAN
2 b A 1 (L) polymer(polypeptide(L)) [213 aa] FXIA ANTIBODY FAB LIGHT CHAIN 318S 387T(R) 388E(K) 389E(L) 394S(Q) 395E(N) (identity: 16.7 %/43.4 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6hhc_C_1 identity=43.4%
queryA       256:IVGGESALPGAWPWQVSLHVQN---VHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFM-----FYGAGYQVEKVISHPNYDSKTKNNDIA: 347
                :****     * ***** **       * ******   ** *****       *       *** **       * *    *   * *  *       ***:
6hhc_C_1       1:IVGGTASVRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTAAHCF-YGVESPKILRVYSGILNQSEIKEDTSFFG----VQEIIIHDQYKMAESGYDIA:  95
SecStr          : BT EE  TTS TTEEEEEE SSS EEEEEEEEEETTEEEE SGGG-TT   GGGEEEEES SBGGG  TT   B ----EEEEEE TT S GGGS   E:    
ExpBur          :beeeeebeeeebbbbbbbbbeeeeeebbbbbbbbbebbbbbbbebb-eebeeeeebebbbebbebeebeeeeeebb----beebbebeeeeebeebebbb:    
Contact         :                                                                 b  b                               

queryA       348:LMKLQKPLTFNDLVKPVCLPNPGMMLQPEQLCWISGWGATEEKGKTSEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFLQGNVDSCQGDSGGPLVT: 447
                :* **       *   *  **           **  ***      *    *  **  *     *  **     **  *****   *  * * *******  :
6hhc_C_1      96:LLKLETTVNYTDSQRPISLPSXXXXXXXYTDCWVTGWGYRKLRDKIQNTLQKAKIPLVTNEECQKRY-RGHKITHKMICAGYREGGKDACKGDSGGPLSC: 194
SecStr          :EEEESS     SSS   B   -------  SEEEEE  EETTTTEE SB EEEE   B HHHHHHT -TTS   TTEEE   SS   B  TTTTT EEEE:    
ExpBur          :bbebeeebeeeeebeebeebe-------eebbebbbbbeeeeeeeeeeebbbbebeebeeeebeeeb-eeeebeeebbbbbeeebeebbbebbbbbbbbb:    
Contact         :                                       bbb    bb                                                    

queryA       448:SKNNIWWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMR: 489
                :  *  * * * **** ***   ***** **    ***     :
6hhc_C_1     195:KHNEVWHLVGITSWGEGCAQRERPGVYTNVVEYVDWILEKTQ: 236
SecStr          :ESSS EEEEEEEEE SSSS TT   EEEEGGGGHHHHHTT  :    
ExpBur          :eeeeeebbbbbbbbeeeebeeeebbbbbbbeebeebbeeeee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123