[pdbjlvh2]Protein Model on 5xwj_A_1_F

Protein Model on 5xwj_A_1_F_1 (TEMPLATE: 5xwj )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TMPS2_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [223 aa]	Trypsin :TRYP_PIG
2	b		F 1 (A)	non-polymer(MPD)	(4S)-2-METHYL-2,4-PENTANEDIOL	376E 379C 380W(L) 446V 447T(C) 448S(N) 449K(G) (identity: 42.9 %/41.9 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:5xwj_A_1 identity=41.9%

queryA       256:IVGGESALPGAWPWQVSLHVQNVHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFYGAGYQVEKVISHPNYDSKTKNNDIALMKLQKPL: 355
                :****        * ****     * **** *   * * ****                 *     *  *     * * ***    *  *** * **  * :
5xwj_A_1       9:IVGGYTCAANSIPYQVSLN-SGSHFCGGSLINSQWVVSAAHCYKSRIQVRLGEHNID-VLEGNEQFINA----AKIITHPNFNGNTLDNDIMLIKLSSPA: 102
SecStr          : BS EE  TTSSTTEEEEE-SSSEEEEEEEEETTEEEE GGG  SS EEEES SBTT-S  S  EEEEE----EEEEE TT  TTT TT  EEEEESS  :    
ExpBur          :bbeeeebeebebebbbbbb-eeebbbbbbbbeeebbbbbbebeeeebebebbbbbbe-eeeeebbebeb----eeeeebeeeeeeebebbbbbbbbeeeb:    

queryA       356:TFNDLVKPVCLPNPGMMLQPEQLCWISGWGATEEKGKT-SEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFLQGNVDSCQGDSGGPLVTSKNNIWW: 454
                :* *  *  * **        *  * ***** *   *      *   *        * * *     **  *** *** *  ********** *        :
5xwj_A_1     103:TLNSRVATVSLPRSCAAAGTE--CLISGWGNTKSSGSSYPSLLQCLKAPVLSDSSCKSSY--PGQITGNMICVGFLEGGKDSCQGDSGGPVVCNGQ----: 194
SecStr          :  SSSS   B  SS   TT E--EEEEESS   SSS    SB EEEEEEB  HHHHHHHS--TTT  TTEEEES TT S B  TT TT EEEETTE----:    
ExpBur          :eeeeebeebebbeeeeeeebe--bbbbbbbbeeeeeeeebeebbbbebbbbeeebbeebb--eeebeeebbbbbbeebeebbbebbbbbbbbbeeb----:    
Contact         :                    b  bb                                                                  bbbb     

queryA       455:LIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMRAD: 491
                :* *  *** ***    ****  *     **     * :
5xwj_A_1     195:LQGIVSWGYGCAQKNKPGVYTKVCNYVNWIQQTIAAN: 231
SecStr          :EEEEEEE SSSSBTTB EEEEEGGGSHHHHHHHHHH :    
ExpBur          :bbbbbbbeeebbeeeebbbbbebbebbebbeebeeee:

Protein Model on 5xwj_A_1_F_1 (TEMPLATE: 5xwj )

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