CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TMPS2_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [221 aa] | Trypsin :TRYP_PIG | |
2 | b | F 1 (A) | non-polymer(XPE) | 3,6,9,12,15,18,21,24,27-NONAOXANONACOSANE-1,29-DIOL | 295A 296H 298V(Y) 333S(T) 337Y(F) 339S(G) 340K(N) (identity: 28.6 %/41.9 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:4doq_A_1 identity=41.9% |
queryA 256:IVGGESALPGAWPWQVSLHVQNVHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFYGAGYQVEKVISHPNYDSKTKNNDIALMKLQKPL: 355 :**** * **** * **** * * * **** * * * * * *** * *** * ** * : 4doq_A_1 1:IVGGYTCAANSIPYQVSLN-SGSHFCGGSLINSQWVVSAAHCYKSRIQVRLGEHNID-VLEGNEQFINA----AKIITHPNFNGNTLDNDIMLIKLSSPA: 94 SecStr : BS EE TTS TTEEEEE-SSSEEEEEEEEETTEEEE GGG SS EEEES SBTT-S S EEEEE----EEEEE TT BTTTTBT EEEEESS : ExpBur :bbeeeebeebebebbbbbb-eeebbbbbbbbeeebbbbbbebeeeebebebbbbbbe-eeeeebbebee----eebeebeeeeeeeeebbbbbbbbeeeb: Contact : bb b b b bb queryA 356:TFNDLVKPVCLPNPGMMLQPEQLCWISGWGATEEKGKT-SEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFLQGNVDSCQGDSGGPLVTSKNNIWW: 454 :* * * * ** * * ***** * * * * * * * ** *** *** * ********** * : 4doq_A_1 95:TLNSRVATVSLPRSCAAAGTE--CLISGWGNTKXXGSSYPSLLQCLKAPVLSDSSCKSSY--PGQITGNMICVGFLEGGKDSCQGDSGGPVVCNGQ----: 186 SecStr : SSSS B SS TT E--EEEEESS -- SB EEEEEEB HHHHHHHS--TTT TTEEEES TT S B TT TT EEEETTE----: ExpBur :eeeeebeebeebeeeeeeebe--bbbbbbbbee--eeeebeebbbbebbbbeeeebeebb--eeebeebbbbbbbeebeebbbebbbbbbbbbeeb----: queryA 455:LIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMRAD: 491 :* * *** *** **** * ** * : 4doq_A_1 187:LQGIVSWGYGCAQKNKPGVYTKVCNYVNWIQQTIAAN: 223 SecStr :EEEEEEE SSSS TT EEEEEGGGGHHHHHHHHHT : ExpBur :bbbbbbbeeebbeeeebbbbbebbebeebbeebeeee: |