Protein Model on 3t2n_B_1_F_1 (TEMPLATE: 3t2n )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(TMPS2_HUMAN) B 1 (B) polymer(polypeptide(L)) [335 aa] Serine protease hepsin :HEPS_HUMAN
2 b F 1 (M) polymer(polypeptide(L)) [212 aa] Antibody, Fab fragment, Light Chain 405I 409R(V) 412S(G) 413R(A) 415V(F) 416Y 429F(Y) 468A 469Y(Q) 470R(K) 471P (identity: 36.4 %/31.2 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:3t2n_B_1 identity=31.2%
queryA       149:VRLYGPNFILQVYSSQRKSWHPVCQDDWNENYGRAACRDMGYKNNFYSSQGIVDDSG---STSFMKLNTSAGNVDIYKKLYHSDA---CSSKAVVSLRCI: 242
                :*        * *       *   *    *       *  **       *   *   *      *       *       *        *         * :
3t2n_B_1       9:VQVSSADARLMVFDKTEGTWRLLCSSRSNARVAGLSCEEMGFLRALTHSELDVRTAGANGTSGFFCVDE--GRLPHTQRLLEVISVCDCPRGRFLAAICQ: 106
SecStr          :EEE SSS BEEEEETTTTEEEEEB  TTHHHHHHHHHHHTT S EEEEEEEEHHHH  TT  SEEEE T--TTGGG S STTSEEEE  SS EEEEEEE :    
ExpBur          :bbeeeeebbbbbebeeeeebbbbbeeebbeebbbbbbbbbbbbeeeeeeeeeeeebeeeebeebbebee--eebeebeebeebbeebebeebebbbbebb:    

queryA       243:ACGVNLNSSRQSRIVGGESALPGAWPWQVSLHVQNVHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFYGAGYQVEKVISHPNY-----: 337
                : **               *   * *******     * ****     *  *****          *  ***   *     *    *  *  *  *     :
3t2n_B_1     107:DCGRRKLXXXXXXXXXXTSL--GRWPWQVSLRYDGAHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGAVAQASP-HGLQLGVQAVVYHGGYLPFRD: 203
SecStr          :  S    ----------  T--TSSTTEEEEEETTEEEEEEEEEETTEEEE GGG  GGG  GGGEEEEES SBTT S-SSEEE EEEEEE TT GGGT :    
ExpBur          :ebbeeee----------eee--bebbbbbbbbbeeeeebbbbbbbbebbbbbbbbbeeebeebeebebbbbbbebeee-ebeeebbebbbbbebbeeeee:    

queryA       338:-DSKTKNNDIALMKLQKPLTFNDLVKPVCLPNPGMMLQPEQLCWISGWGATEEKGKTSEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFLQGNVDS: 436
                :  *    *****  *  **       *****  *  *     *   **           **  * *  *    **    * * * * * ***        :
3t2n_B_1     204:PNSEENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWXXXXXXXXXXGVLQEARVPIISNDVCNGADFYGNQIKPKMFCAGYPXXXXXX: 303
SecStr          :TT    TT  EEEEESS     SS    B   TT    TT EEEEEE ---------- B EEEEEEEE HHHHHHH SS     TTEEEE   ------:    
ExpBur          :eeeebbbbbbbbbbbeeebeeeeebbbbbbbbbeeeeeeeeebbbbbe----------eebeeeebebbeeeebeeeeeeeeebeeebbbbbee------:    
Contact         :                                                                    b   b  bb bb            b       

queryA       437:CQGDSGGPLV----TSKNNIWWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMR: 489
                :  ****** *     *    * * *  **      *  ****  *  *  **     :
3t2n_B_1     304:XXGDSGGPFVCEDSISRTPRWRLCGIVSWXXXXXXAQKPGVYTKVSDFREWIFQAIK: 360
SecStr          :--  TT EEEEEE TTSS EEEEEEEE  ------    EEEEEGGGGHHHHHHHHH:    
ExpBur          :--ebebbbbbbebebbeeebbbbbbbbbe------eeeeeebbebeebbebbbebbe:    
Contact         :                                   bbbb                                                             


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