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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TMPS2_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [339 aa] | Serine protease hepsin :HEPS_HUMAN | |
2 | b | C 1 (H) | polymer(polypeptide(L)) [203 aa] | Antibody, Fab fragment, Heavy Chain | 340K(E) 408Q(D) 411N 412S(G) 413R(A) 414Y(D) 415V(F) 416Y 417D(G) 418N 419L(Q) 421T(K) (identity: 25.0 %/31.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:3t2n_A_1 identity=31.0% |
queryA 149:VRLYGPNFILQVYSSQRKSWHPVCQDDWNENYGRAACRDMGYKNNFYSSQGIVDDSG---STSFMKLNTSAGNVDIYKKLYHSDA---CSSKAVVSLRCI: 242 :* * * * * * * ** * * * * * * * * : 3t2n_A_1 9:VQVSSADARLMVFDKTEGTWRLLCSSRSNARVAGLSCEEMGFLRALTHSELDVRTAGANGTSGFFCVDE--GRLPHTQRLLEVISVCDCPRGRFLAAICQ: 106 SecStr :EEE SSS BEEEEETTTTEEEEEB TTHHHHHHHHHHHTT S EEEEEEEEHHHH TT SEEEE T--TTGGG S STTSEEEE SS EEEEEEE : ExpBur :bbeeeeebbbbbebeeeeebbbbbbeebbeebbbbbbbbbbbbeeeeeeeebeeebeeeebeebbebee--eebeebeebeebbeebebeebebbbbebb: queryA 243:ACGVNLNSSRQSRIVGGESALPGAWPWQVSLHVQNVHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFYGAGYQVEKVISHPNY-----: 337 : ** * * ******* * **** * ***** * *** * * * * * * : 3t2n_A_1 107:DCGRRKLPXXXXXXXRDTSL--GRWPWQVSLRYDGAHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGAVAQASP-HGLQLGVQAVVYHGGYLPFRD: 203 SecStr : S ------- B T--TSSTTEEEEEETTEEEEEEEEEETTEEEE GGGS GGG GGGEEEEES SBTT S-SSEEE EEEEEEETT GGGT : ExpBur :ebbeeeee-------eebee--eebbbbbbbbbeeeeebbbbbbbbebbbbbbebbeeebeebeebebbbbbbebebe-ebeeebbebbbbbbbbeeeee: queryA 338:-DSKTKNNDIALMKLQKPLTFNDLVKPVCLPNPGMMLQPEQLCWISGWGATEEKGKTSEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFLQGNVDS: 436 : * ***** * ** ***** * * * ** ** * * * ** * * * * * *** : 3t2n_A_1 204:PNSEENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWXXXXXXXXXXGVLQEARVPIISNDVCNGADFYGNQIKPKMFCAGYPXXXXXX: 303 SecStr :TT TT EEEEESS SS B TT TT EEEEEE ---------- B EEEEEEEE HHHHHHH SS TTEEEE ------: ExpBur :eeeebebbbbbbbbbeeebeeeeebbbbbbbbbeeeeeeeeebbbbbe----------eebebbebebeeeeebeeeeeeeeebeeebbbbbee------: Contact : b b bbbbbbbbb b queryA 437:CQGDSGGPLV----TSKNNIWWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMR: 489 : ****** * * * * * * * **** * * ** : 3t2n_A_1 304:XXGDSGGPFVCEDSISRTPRWRLCGIVSXXXXXXLAQKPGVYTKVSDFREWIFQAIK: 360 SecStr :-- TT EEEEEE TTSS EEEEEEEE ------ S EEEEEGGGGHHHHHHHHH: ExpBur :--ebebbbbbbebebbeeebbbbbbbbe------eeeeeeebbebeebbebbbebbe: |