Protein Model on 3fvf_A_1_D_1 (TEMPLATE: 3fvf )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(TMPS2_HUMAN) A 1 (B) polymer(polypeptide(L)) [248 aa] Prostasin :PRSS8_HUMAN
2 b D 1 (B) non-polymer(DMS) DIMETHYL SULFOXIDE 387T(P) 437C 438Q 463S(D) 464G(A) 465C (identity: 50.0 %/36.1 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:3fvf_A_1 identity=36.1%
queryA       256:IVGGESALPGAWPWQVSLHVQNVHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFYGAGYQVEKVISHPNYDSKTKNNDIALMKLQKPL: 355
                :* ** **  * ******     *******     *   ****                    *             * ** *       ****  *  * :
3fvf_A_1       1:ITGGSSAVAGQWPWQVSITYEGVHVCGGSLVSEQWVLSAAHCFPSEHHKEAYEVKLGAHQLDSYSEDAKVSTLKDIIPHPSYLQEGSQGDIALLQLSRPI: 100
SecStr          : BS EE  TTSSTTEEEEEETTEEEEEEEE SSSEEEE GGGS TTS GGGEEEEES SBTTS  TT EEE EEEEEE TT  STT S   EEEEESS  :    
ExpBur          :bbeeeebeeeebbbbbbbbbeeeeebbbbbbbebbbbbbbebbeeeeeeeebebebbbbebeeeeeebeebebeebbebeeeeeeebebbbbbbbbeeeb:    

queryA       356:TFNDLVKPVCLPNPGMMLQPEQLCWISGWG--ATEEKGKTSEVLNAAKVLLIETQRCNSRYVYD------NLITPAMICAGFLQGNVDSCQGDSGGPLVT: 447
                :**     *  **           *   ***  *      *   *    * **    *** *  *            * ***   *  * *********  :
3fvf_A_1     101:TFSRYIRPISLPAAQASFPNGLHCTVTGWGHVAPSVSLLTPKPLQQLEVPLISRETCNSLYNIDAKPEEPHFVQEDMVCAGYVEGGKDACQGDSGGPLSC: 200
SecStr          :  BTTB   B   TT    TT EEEEEESS SBTTB   TT B EEEEEEEE HHHHHHHHTTT  TT      TTEEEES TT S B  TT TT EEEE:    
ExpBur          :eeeeebeebeebeeeeebeeeeebbbbbbbeeeeeeebeeeebbbbbebbbbbeeebbebbeeeeeeeeebebeebbbbbbeeebeebbbebbbbbbbbb:    
Contact         :                              b  b                                                       bb         

queryA       448:SKNNIWWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQM: 488
                :     * * *  ***  *    *****        **    :
3fvf_A_1     201:PVEGLWYLTGIVSWGDACGARNRPGVYTLASSYASWIQSKV: 241
SecStr          :EETTEEEEEEEEEE SSTT TT  EEEEEGGGGHHHHHHHH:    
ExpBur          :eeeeeeebbbbbbeeeebeeebbbbbbbbbbebbebbeeeb:    
Contact         :               bbb                                                                                  


Input Residue Numbers for Focused Sites

ex) 2,15,123