Protein Model on 2f9n_A_1_K_1 (TEMPLATE: 2f9n )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(TMPS2_HUMAN) A 1 (A) polymer(polypeptide(L)) [243 aa] alpha I tryptase :TRYA1_HUMAN
2 b K 1 (A) non-polymer(BU3) (R,R)-2,3-BUTANEDIOL 416Y(L) 417D(G) 467K(Q) 468A(P) 469Y(N) 470R (identity: 16.7 %/40.7 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:2f9n_A_1 identity=40.7%
queryA       256:IVGGESALPGAWPWQVSLHVQN---VHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFY-GAGYQVEKVISHPNYDSKTKNNDIALMKL: 351
                :****  *    ******* *      * **** * * *  ******                **     *      *   * **         ****  *:
2f9n_A_1       1:IVGGQEAPRSKWPWQVSLRVRDRYWMHFCGGSLIHPQWVLTAAHCVGPDVKD---LATLRVQLREQHLYYQDQLLPVSRIIVHPQFYIIQTGADIALLEL:  97
SecStr          : BS EE  TTS TTEEEEEEESSSEEEEEEEEEEETTEEEE GGGG SS   ---GGGEEEE S SBTTTT   B EEEEEE TT  SS  TT  EEEEE:    
ExpBur          :bbeeeebeeeebbbbbbbbeeeeeeebebbbbbbeeebbbbbbebbeeeeee---eeebebbbbbbbbeeeeeeeebeeebebeebeeeeebbbbbbbbb:    

queryA       352:QKPLTFNDLVKPVCLPNPGMMLQPEQLCWISGWGATE--EKGKTSEVLNAAKVLLIETQRCNSRYVYD-------NLITPAMICAGFLQGNVDSCQGDSG: 442
                :  *      *  * **       *   **  ***     *       *   **   *   *   *            *   * ***  *   ********:
2f9n_A_1      98:EEPVNISSRVHTVMLPPASETFPPGMPCWVTGWGDVDNDEPLPPPFPLKQVKVPIMENHICDAKYHLGAYTGDDVRIIRDDMLCAGNSQR--DSCQGDSG: 195
SecStr          :SS     SSS   B   TT    TT  EEEEES  SBTTB   TT B EEEE  EE HHHHHHHHHTT  S TTS  S TTEEEE  SSS--B  TT TT:    
ExpBur          :eeebeeeeebeebebbeeeeebeeebebebbbbbbeeeeeebeeeebbebbebebeebeebbeebbeeeeeeeeeebbeebbbbbbeeee--bbbeebbb:    
Contact         :                                                                  bb                                

queryA       443:GPLVTSKNNIWWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYR: 486
                :****   *  *   *  *** ***   *** *  *    ***  :
2f9n_A_1     196:GPLVCKVNGTWLQAGVVSWGEGCAQPNRPGIYTRVTYYLDWIHH: 239
SecStr          : EEEEEETTEEEEEEEEEE SSSSBTTB EEEEEGGGGHHHHHH:    
ExpBur          :bbbbbebeeeebbbbbbbeeeebbeeebbbbbbbbbebbebbee:    
Contact         :                        bbbb                                                                        


Input Residue Numbers for Focused Sites

ex) 2,15,123