[pdbjlvh2]Protein Model on 1xxf_A_1_D

Protein Model on 1xxf_A_1_D_1 (TEMPLATE: 1xxf )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TMPS2_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [237 aa]	Coagulation factor XI :FA11_HUMAN
2	b		D 1 (D)	polymer(polypeptide(L)) [138 aa]	Ecotin :ECOT_ECOLI	334H 335P(D) 336N(Q) 338D(K) 344N(Y) 369P(K) 372M(R) 423A(K) 479V(E) 480F(Y) 481T(V) 482D 483W 486R(E) (identity: 21.4 %/44.1 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:1xxf_A_1 identity=44.1%

queryA       256:IVGGESALPGAWPWQVSLHVQN---VHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFM-----FYGAGYQVEKVISHPNYDSKTKNNDIA: 347
                :****     * ***** **       * ******   ** *****       *       *** *        * *    *   * *  *       ***:
1xxf_A_1       1:IVGGTASVRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTAAHCF-YGVESPKILRVYSGILNQAEIKEDTSFFG----VQEIIIHDQYKMAESGYDIA:  95
SecStr          : BS EE  TTSSTTEEEEEE SSS EEEEEEEEEETTEEEE GGGG-TT   GGGEEEE S SBGGG  SS   EE----EEEEEE TT S TTTS   E:    
ExpBur          :bbeeeebeeeebbbbbbbbbeeeeeebbbbbbbbbebbbbbbbebb-eeeeeeebbbbbbebbbbeebeeeeeebb----beeebebeeeeebeebebbb:    
Contact         :                                                                                      bbb b     b   

queryA       348:LMKLQKPLTFNDLVKPVCLPNPGMMLQPEQLCWISGWGATEEKGKTSEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFLQGNVDSCQGDSGGPLVT: 447
                :* **       *   * ***  *        **  ***      *    *  **  *     *  **     **  *****   *  * * *******  :
1xxf_A_1      96:LLKLETTVNYADSQRPICLPSKGDRNVIYTDCWVTGWGYRKLRDKIQNTLQKAKIPLVTNEECQKRY-RGHKITHKMICAGYREGGKDACKGDSGGPLSC: 194
SecStr          :EEEESS    BTTB   B   GGGGG   S EEEEES  SSSS    SB EEEE  EE HHHHHHHT-TTS   TTEEEE  TT   B  TT TT EEEE:    
ExpBur          :bbbbeeebeeeeebeebeebeeeeeeeebeebebbbbbeeeeeeeebeebbebebeebeeeebeeeb-eeeebeeebebbbeeebeebbbebbbbbbbbb:    
Contact         :                     b  b                                                  b                        

queryA       448:SKNNIWWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMRA: 490
                :  *  * * * **** ***   ***** **    ***     *:
1xxf_A_1     195:KHNEVWHLVGITSWGEGCAQRERPGVYTNVVEYVDWILEKTQA: 237
SecStr          :EETTEEEEEEEEEE STTT TT  EEEE GGGGHHHHHHHT  :    
ExpBur          :eeeeebbbbbbbbbeeebbeeeebbbbbbbbbbbebbeeeeee:    
Contact         :                               bbbbb  b

Protein Model on 1xxf_A_1_D_1 (TEMPLATE: 1xxf )

Input Residue Numbers for Focused Sites