Protein Model on 1rjx_A_12_B_12 (TEMPLATE: 1rjx )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(TMPS2_HUMAN) A 12 (B) polymer(polypeptide(L)) [243 aa] Plasminogen :PLMN_HUMAN
2 b B 12 (B) non-polymer(SO4) SULFATE ION 489R (identity: 100.0 %/39.6 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:1rjx_A_12 identity=39.6%
queryA       256:IVGGESALPGAWPWQVSLHVQ-NVHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFYGAGYQVEKVISHPNYDSKTKNNDIALMKLQKP: 354
                : ***  * *  *******      * ***  * ***  ***** **                           *      *         **** **  *:
1rjx_A_12     18:VVGGCVAYPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHCLEKSPRPSSYKVILGAHQEVNLEPHVQEIEVSRLFLEPT------RKDIALLKLSSP: 111
SecStr          :STT EE  TTSSTTEEEEEETT  EEEEEEEEETTEEEEEGGGGTT S GGGEEEEES  BSSS  TT EEEEEEEEEE SS------S  EEEEEESS :    
ExpBur          :eeebbebeebbbbbbbbbbeeeeebebbbbbbeeebbbbbbebbeebeebebbbbbbbbbebeeeeeebbebebeeeeebee------eeebbbbbbeee:    

queryA       355:LTFNDLVKPVCLPNPGMMLQPEQLCWISGWGATEEKGKTSEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFLQGNVDSCQGDSGGPLVTSKNNIWW: 454
                :    * * * *** *         * * ***           *  *    **   **              *** * *  ************        :
1rjx_A_12    112:AVITDKVIPACLPSPNYVVADRTECFITGWGEXXXXFGAG-LLMEAQLPVIENKVCNRYEFLNGRVQSTELCAGHLAGGTDSCQGDSGGPLVCFEKDKYI: 210
SecStr          :    SS    B   TT    TT EEEEEE   ----   S-B EEEEEEEE HHHHTSTTTTTT S TTEEEES SSS   B  S TT EEEEE SSSEE:    
ExpBur          :beeeeebbbbbebeeeeebeeeeebbbbbbee----eeee-ebbbbbbbbbebebbeeeeebeeebeebbbbbbeeeeebebebbbbbbbbbbeeeeebb:    

queryA       455:LIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMR: 489
                :* * **** ***    ****  *  *  **   **:
1rjx_A_12    211:LQGVTSWGLGCARPNKPGVYVRVSRFVTWIEGVMR: 245
SecStr          :EEEEE TTS  BBTTB EEEEEGGGGHHHHHHHHH:    
ExpBur          :bbbbbbeeebbbeeeebbbbbbbbebbeebebbbe:    
Contact         :                                  b                                                                 


Input Residue Numbers for Focused Sites

ex) 2,15,123