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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TMPS2_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [260 aa] | BETA-ACROSIN HEAVY CHAIN :ACRO_SHEEP | |
2 | b | C 1 (B) | branched(oligosaccharide) | alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | 411N 417D(N) 418N(G) 420I 421T(R) 422P(S) (identity: 33.3 %/44.2 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:1fiw_A_1 identity=44.2% |
queryA 256:IVGGESALPGAWPWQVSLHV------QNVHVCGGSIITPEWIVTAAHC--VEKPLNNPWHWTAFAGILRQSFMFYGAG---------YQVEKVISHPNYD: 338 :* ** * ***** *** ****** * ***** * * * * *** * * * : 1fiw_A_1 1:IIGGQDAAHGAWPWMVSLQIFTYHNNRRYHVCGGSLLNSQWLLTAAHCFRIKKKV------TDWRLIFGAKEVEWGTNKPVKPPLQERYVEKIIIHEKYS: 94 SecStr : BS EE TTSSTTEEEEEEEETTTTEEEEEEEEEEEETTEEEE GGGGSS SG------GGEEEEES SB TT S TT EEEEEEEEEE TT B: ExpBur :bbeeeebeeeebebbbbbbbbeeeeeebebebbbbbbeeebbbbbbbbbeeeeee------ebbbbbbbbeebeebbeeebeeeebebebeebbebeebe: queryA 339:SKTKNNDIALMKLQKPLTFNDLVKPVCLP--NPGMMLQPEQLCWISGWGATEEKGK-TSEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFLQGNVD: 435 : ******* * * * *** * * * ** *** * ** * * * ** *** * * *** * *: 1fiw_A_1 95:ASSEANDIALMKITPPVTCGHFIGPGCLPQFRAGPPRVP-QTCWVAGWGFLQENARRTSPMLQEARVDLIDLGLCNSTRWYNGRIRSTNVCAGYPEGKID: 193 SecStr :TTTTBT EEEEEES BTTB B TT S SS- EEEEEES SSTT SS SB EEEEEEEE HHHHTSTTTTTT TTEEEEE TT SSB: ExpBur :eeeebbbbbbbebeeebeeeeebbebbbbeeeebeeeee-eebbbbbbbeeeeeeeebbebbbbbebebbeeeebeeeebbeeebeebbbbbbeeebeeb: Contact : b bb bbb queryA 436:SCQGDSGGPLV--TSKNNIWWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQM: 488 : ********* * * * **** *** * ***** ** : 1fiw_A_1 194:TCQGDSGGPLMCKDSAENSYVVVGITSWGVGCARAKRPGVYTSTWSYLNWIASKI: 248 SecStr : TT TT EEEEE SSSS EEEEEEEEE SSSSBTTB EEEEESGGGHHHHHHHH: ExpBur :bbebbbbbbbbbeeeeeeeebbbbbbbbeeebbeeeebbbbbbbeebbebbbeeb: |