Protein Model on 5gnv_A_1_B_1
(TEMPLATE: 
5gnv
)Protein Model on 5gnv_A_1_B_1
(TEMPLATE: 5gnv
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DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(PALS1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [181 aa] | Disks large homolog 4 :DLG4_RAT | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [19 aa] | Microtubule-associated protein 1A :MAP1A_MOUSE | 494E(D) 500M(L) 509S 512P 516R 528Y 547E 549G 550E(Q) 551F(Y) 556Y 557G 558T 574L(I) 576S(D) (identity: 60.0 %/39.2 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5gnv_A_1 identity=39.2% |
queryA 480:RPIILIGPQNCGQNELRQRLMNKEKDRFASAVPHTTRSRRDQEVAGRDYHFVS-RQAFEADIAAGKFIEHGEFEKNLYGTSIDSVRQVINSGKICLLSLR: 578
:**** ** * * * * * ****** * * ******** * * ** * **** * ***** *** * ** * * :
5gnv_A_1 11:RPIIILGPTKDRAND---DLLSEFPDKFGSCVPHTTRPKREYEIDGRDYHFVSSREKMEKDIQAHKFIEAGQYNSHLYGTSVQSVREVAEQGKHCILDVS: 107
SecStr : EEEESTTHHHHHH---HHHHH TTTEE EE S SS BTTTBEE S HHHHHHHHHTTTEEEEEEETTEEEEEEHHHHHHHHHTT EEEE :
ExpBur :ebbbbbbbbbeebbe---ebeeeeeeebbebbebbbbeeeeebeeeeeebbeeeeeebeebeeeeebbeeeeeeeebebbbbebbeebbeeeebbbbebe:
Contact : b b b b b b b bbb bbb b b
queryA 579:TQSLKTLRNSDLKPYIIFIAPPSQERLRALLAKEGKNPKPEELREIIEKTREMEQNNGHYFDTAIVNSDLDKAYQELLRLINKL: 662
: * * * *** * * * * * * ** * * * * *:
5gnv_A_1 108:ANAVRRLQAAHLHPIAIFIRPRSLENVLEI----NKRITEEQARKAFDRATKLEQEFTECFSAIVEGDSFEEIYHKVKRVIEDL: 187
SecStr :THHHHHHHTTT EEEEE SSHHHHHHH---- TTS HHHHHHHHHHHHHHHHHHGGG SEEE SSHHHHHHHHHHHHHHH:
ExpBur :bebbbebeeeebebbbbbbebeeeebbeeb----eeeeeeeebeebeeebeebeeeeeebbebebebeebeebbeebeebbeee:
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[assembly_id:1]
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