Protein Model on 3tr0_A_1_A_2 (TEMPLATE: 3tr0 )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(PALS1_HUMAN) A 1 (A) polymer(polypeptide(L)) [201 aa] Guanylate kinase :KGUA_COXBU
2 b A 2 (A) polymer(polypeptide(L)) [201 aa] Guanylate kinase :KGUA_COXBU 598A(L) 599P 600P 602Q(I) 633Q(R) 638Y 639F 640D 641T(Y) 642A(L) 644V 654E(N) 657R(H) 658L(I) 660N(S) (identity: 40.0 %/32.0 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:3tr0_A_1 identity=32.0%
queryA       477:NRKRPIILIGPQNCGQNELRQRLMNKEKDRFASAVPHTTRSRRDQEVAGRDYHFVSRQAFEADIAAGKFIEHGEFEKNLYGTSIDSVRQVINSGKICLLS: 576
                :*     *   *   *   *  *   *          ****  *     * ** *     * *    * * **       ***  * *      *   ** :
3tr0_A_1       5:NKANLFIISAPSGAGKTSL-VRALVKALAEIKISISHTTRPKRPGDQEGVDYFFIDETRFQAUVKEGAFLEHATIYERHYGTEKDWVLRQLKAGRDVLLE: 103
SecStr          :    EEEEE  TTS HHHH-HHHHHHHSSSEEE   EE S   TT  BTTTBEE  HHHHHHHHHHT EEEEEEETTEEEEEEHHHHHHHHHTT EEEEE:    
ExpBur          :eebbbbbbbbbebbbeeeb-beebbeebeebebbebbbbbeeeeebeeeeeeebbeeeebeeeeeeeebbbebeeeeebbbbeeeebeebbeeeebbbbb:    

queryA       577:LRTQSLKTLRNSDLKPYIIFIAPPSQERLRALLAKEGKNPKPEELREIIEKTREMEQNN-GHY--FDTAIVNSDLDKAYQELLRLIN: 660
                :   *     *        *** *** * **  * *            ***           **  **   **   * * * *   * :
3tr0_A_1     104:IDWQGARQIRELFPPALSIFILPPSIEALRERLIKRRQDDTA-----IIEQRLALAREEUAHYKEFDYLVVNDNFDQAVQNLIHIIS: 185
SecStr          :  HHHHHHHHHH TT EEEEEE S HHHHHHHHHT TTS SS-----THHHHHHHHHHHHTTGGG SEEEE SSHHHHHHHHHHHHH:    
ExpBur          :bbeebbeebeeeeeebbbbbbebeeeebbeeebeeeeebeee-----bbeebbeebeebeebeeebeeebebeeeeebbeebbebbe:    
Contact         :                     bbb b                              b     bb bbbb b         b  bb b             


Input Residue Numbers for Focused Sites

ex) 2,15,123