CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(DDX1_HUMAN) | F 1 (F) | polymer(polypeptide(L)) [426 aa] | ATP-dependent RNA helicase DDX19B :DD19B_HUMAN | |
2 | b | N 1 (F) | non-polymer(PO4) | PHOSPHATE ION | 325G(R) 346T 347P 348G 349R(T) 380Y(H) (identity: 50.0 %/34.7 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:6b4i_F_1 identity=34.7% |
queryA 256:VALSKAPDGYIVKSQHSGN--------AQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP: 347 : * * * ** ** * * * * * *** ** * * * * * * * ** ***: 6b4i_F_1 76:LMLAEPPQNLIAQSQ-SGTGKTAAFVLAMLSQVEPANKYPQCLCLSPTYELALQTGKVIEQMGKFY--PELKLAYAVRGNKLERGQKISEQ---IVIGTP: 169 SecStr :HHHSSS EEEEE -TTSSHHHHHHHHHHHH TTS S EEEE SSHHHHHHHHHHHHHHTTTS--TT EEEESTT TT S---EEEE H: ExpBur :bbebeeebbbbbbbb-bbbbbbbbbbbbbbbebeeeeeebbbbbbbbeeebbebbbeebeebbeeb--eebebbbbbeeeebeeeeebeeb---bbbbbb: Contact : b bb queryA 348:GRLDDLVSTGK-LNLSQVRFLVLDEADGLL-SQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV: 445 :* * * * ****** ** * * * * *** * * * * ** * ** : 6b4i_F_1 170:GTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLP------RNCQMLLFSATFED-SVWKFAQKVVPDPNVIKLKREEETLDTIKQYY: 262 SecStr :HHHHHHHHTS S GGG EEEE HHHHTTSHHHHHHHHHHHHTS ------SSSEEEEEES H-HHHHHHHHHSSS EEEEE TTEEEEE: ExpBur :bbbbebbeeeebbebeebebbbbbbbbbbbeeeebbebbbebbeebb------eebbbbbbbbeeee-ebeebbeebbeeebbbebeebebebebbebbb: Contact :bb b queryA 446:VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCL: 545 :* * * * ** *** * * * *** *: 6b4i_F_1 263:VLCSSRDEKF-------------------------------QALCNLYGAITIA--------QAMIFCHTRKTASWL-------AAELSKEGHQVAL--L: 314 SecStr :EE SSHHHHH-------------------------------HHHHHHBTTB --------EEEEE S HHHHHHH-------HHHHHHTT EE--E: ExpBur :bebeeeeebb-------------------------------ebbeebeebbebe--------bbbbbbeeeebbeeb-------beebeeeeeebbe--b: queryA 546:HGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEK------QNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCY: 639 : * * *** * * * * ***** * *** ** * * ***** ** *** * : 6b4i_F_1 315:SGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSK-----------------: 397 SecStr : TTS HHHHHHHHHHHHTTS SEEEESSTTTT SSEEEEEESS B GGG B HHHHHHHHHTTTGGG EEEEEEE SH-----------------: ExpBur :beebeeeeebeebeebbeeebebbbbbebbbebbbbeebebbbbbbbbeeeeeebebebbebbbbbbbbeeeebbbbbbbeee-----------------: queryA 640:NTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPD: 676 : * * * ** * * *: 6b4i_F_1 398:--------------HSMNILNRIQEHFNKKIERLDTD: 420 SecStr :--------------HHHHHHHHHHHHH EEE SS: ExpBur :--------------ebbebbeebeeebeeebeebebe: |