Protein Model on 5nt7_D_1_C_1
(TEMPLATE: 
5nt7
)Protein Model on 5nt7_D_1_C_1
(TEMPLATE: 5nt7
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(DDX1_HUMAN) | D 1 (D) | polymer(polypeptide(L)) [153 aa] | ATP-dependent RNA helicase vasa, isoform A :VASA1_DROME | |
| 2 | b | C 1 (C) | polymer(polypeptide(L)) [92 aa] | Maternal effect protein oskar :OSKA_DROME | 496Y 499R 517I(R) 520D 521N(F) 523E(A) 524Q(S) 525Y(F) 527I(S) 528Q(E) 529Q(K) 539Q(E) 542C(T) 543V(T) 544C(S) 546H 547G 548D 549R 550K(L) 553E(Q) 554R 566V(M) (identity: 34.8 %/38.2 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5nt7_D_1 identity=38.2% |
queryA 494:GEYAVRA----IKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVIN: 589
: ** * * * * * ** * * * **** * * * ** * ** * ** ** ** ***:
5nt7_D_1 13:NKYAKRSKLIEILSEQADGTIVFVETKRGADFLASFLSEK---------EFPTTSIHGDRLQSQREQALRDFKNGSMKVLIATSVASRGLDIKNIKHVIN: 103
SecStr : GGGHHHHHHHHHHH TTEEEEES HHHHHHHHHHHHHT---------T EEEE TTS HHHHHHHHHHHHHTS SEEEEETTTTTT SEEEE:
ExpBur :eeeebeeebbebbeeebeebbbbbeeeeebeebbeebeee---------ebebbbbbeeeeeeeeeebbeebeeeeeebbbbbbebbeebebeebebbbb:
Contact : b b b bb bbb bbb b bbb bbbbb bb b
queryA 590:VTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK: 625
: * ******* * * * ** :
5nt7_D_1 104:YDMPSKIDDYVHRIGRTXXXXXXGRATSFFDPEKDR: 139
SecStr :SS SSHHHHHHHHTT ------ EEEEEE TTT G:
ExpBur :bbbbeebebbeebbebb------eebbbbbbeeebe:
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[assembly_id:1]
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