Protein Model on 5anr_B_3_A_2 (TEMPLATE: 5anr )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(DDX1_HUMAN) B 3 (B) polymer(polypeptide(L)) [360 aa] PROBABLE ATP-DEPENDENT RNA HELICASE DDX6 :DDX6_HUMAN
2 b A 2 (A) polymer(polypeptide(L)) [245 aa] CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 1 :CNOT1_HUMAN 296R 325G 346T 378Q 382D 383F 386R(I) 410L(F) 412S(P) 413F(L) 416K(Q) 595E(L) 597Q(E) 601H (identity: 50.0 %/34.8 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:5anr_B_3 identity=34.8%
queryA         4:FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA: 103
                :*       *      ** *  *  ** ****  * * * *  *  * ** **  **                                            :
5anr_B_3       7:FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLE-----------------------------------------:  65
SecStr          :GGGG   HHHHHHHHHTT  S  HHHHHHHHHHHHT  EEEE  TTS HHHHHHHHHHH-----------------------------------------:    
ExpBur          :beebebeeebeebbeeeeeeebeebbeebbeebeeeebbbbebbeebebbbbbbbbbbe-----------------------------------------:    

queryA       104:IGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHV: 203
                :                                                                                                    :
5anr_B_3      -1:----------------------------------------------------------------------------------------------------:  -1
SecStr          :----------------------------------------------------------------------------------------------------:    
ExpBur          :----------------------------------------------------------------------------------------------------:    

queryA       204:KFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP---------KALIVEP: 294
                :                                                                                              *    *:
5anr_B_3      66:------------------------------------------------------------------------------------RLDLKKDNIQAMVIVP:  81
SecStr          :------------------------------------------------------------------------------------H  TTS S  EEEE S:    
ExpBur          :------------------------------------------------------------------------------------ebeeeeeebbbbbbbe:    

queryA       295:SRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQV: 394
                : **** *      *  *     *       **   **    *   *  *  ****  **   *      *   ****** ****   **   *   *   :
5anr_B_3      82:TRELALQVSQICIQVSKHMGGAKV--MATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQ---DFVQIMEDIILTL: 176
SecStr          :SHHHHHHHHHHHHHHTTTSSS  E--EEE TTS HHHHHHHTTS  SEEEE HHHHHHHHHTTSS  TT  EEEEESHHHHTST---TTHHHHHHHHHTS:    
ExpBur          :eeebbeebbeebeebbeebeebeb--bebbeeeeeeebeeebeeebbbbbbbbebbbebbeeebbebeebebbbbbbbbebbee---eeeeebeebbeeb:    
Contact         : b                            b                    b                               b   bb  b        

queryA       395:TSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKG: 494
                :    *  *    ***     * *        *    *  *                 * *              **               *        :
5anr_B_3     177:P---KNRQILLYSATF-PLSVQKFMNSHLQKPYEINLMEELTLKGVTQYYAYV----TER------------QKVHCLNT---------LFSRL------: 241
SecStr          : ---TT EEEEEES  - HHHHHHHHHH  S EEEE     B TT EEEEEE ---- GG------------GHHHHHHH---------HTTTS------:    
ExpBur          :e---eebbbbbbbeee-eeebeebbeebbeeeeebeeeeeeebeebebebbeb----eee------------ebbebbee---------beeee------:    
Contact         :               b bb  b                                                                              

queryA       495:EYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPD: 594
                :             * ****        *     * *          **   *       *      *  *  * * ***      **  *  ***   * :
5anr_B_3     242:----------QINQSIIFCNSSQRVELLAKKISQLG---------YSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFXXXXDIQAVNVVINFDFPK: 322
SecStr          :----------  SEEEEE SSHHHHHHHHHHHHHTT---------  EEEE SSS HHHHHHHHHHHHTTSSSEEEE S  ----  TTEEEEEESS  S:    
ExpBur          :----------ebebbbbbbeebeebeebbeebeeee---------bebeebbeebeeeebeebeeebbeeebebbbbbeee----ebeebebbbbbbbbe:    

queryA       595:EKQNYVHRIGRVGRAERMGLAISLVA: 620
                :    * ***** *     **** *  :
5anr_B_3     323:LAETYLHRIGRSGXXXXLGLAINLIT: 348
SecStr          :SHHHHHHHH B  ----  EEEEEE :    
ExpBur          :ebebbeebbebee----eeebbbbbb:    
Contact         :b b   b

Input Residue Numbers for Focused Sites

ex) 2,15,123