[pdbjlvh2]Protein Model on 1t6n_B_1_D

Protein Model on 1t6n_B_1_D_1 (TEMPLATE: 1t6n )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(DDX1_HUMAN)	B 1 (B)	polymer(polypeptide(L)) [207 aa]	Probable ATP-dependent RNA helicase :UAP56_HUMAN
2	b		D 1 (B)	non-polymer(FLC)	CITRATE ANION	47E(K) 48T(S) 49G 50S(M) 51G 52K 53T 54G(A) 305N(E) (identity: 44.4 %/35.1 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:1t6n_B_1 identity=35.1%

queryA         2:AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSA: 101
                :  *      **   *        *   * * **    * ***  *  * ***  *     *                                       :
1t6n_B_1      14:SGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQ---------------------------------------:  74
SecStr          :  STTS   HHHHHHHHHTT     HHHHHHHHHHTTT  EEEE  TTS HHHHHHHHHHH---------------------------------------:    
ExpBur          :ebbeebebeeebeebbeebeeeeebebbeebbeebbeeebbbbbbeeeeebbbbbbbbbbb---------------------------------------:    
Contact         :                                             bbbbbbbb                                               

queryA       102:FAIGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKG: 201
                :                                                                                                    :
1t6n_B_1      -1:----------------------------------------------------------------------------------------------------:  -1
SecStr          :----------------------------------------------------------------------------------------------------:    
ExpBur          :----------------------------------------------------------------------------------------------------:    

queryA       202:HVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPK----------ALI: 291
                :                                                                                                  * :
1t6n_B_1      75:---------------------------------------------------------------------------------------QLEPVTGQVSVLV:  87
SecStr          :---------------------------------------------------------------------------------------H    TT   EEE:    
ExpBur          :---------------------------------------------------------------------------------------ebeeeeeebbbbb:    

queryA       292:VEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE-NGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQ: 390
                :    **** *       * **  * *       **        **  *   ********   *     ***       *** *  * *       *    :
1t6n_B_1      88:MCHTRELAFQISKEYERFSKYMPNVKVA--VFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLD---MRRDVQE: 182
SecStr          :E S HHHHHHHHHHHHHHTTT TT  EE--EE  SS HHHHHHHHHHS  SEEEE HHHHHHHHHTTSS  TT  EEEEESHHHHHHSHH---HHHHHHH:    
ExpBur          :bbeeeeebeebbebbeebbeebeebeeb--ebbbeeeeeebeeebeeeebbbbbbbbebbbebbeeeebebeebebbbbbbbbebbeeee---beeebee:    
Contact         :             b                                                                                      

queryA       391:IPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWV: 429
                :*   *   *  **   **** *        * *  *   :
1t6n_B_1     183:IFRMTPHEK--QVMMFSATL-SKEIRPVCRKFMQDPMEI: 218
SecStr          :HHHTS SS --EEEEEES  - TTTHHHHHTT SS EEE:    
ExpBur          :beeebeeeb--bbbbbbeeb-eeebbebbeebbeebbeb:

Protein Model on 1t6n_B_1_D_1 (TEMPLATE: 1t6n )

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