#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [793 aa] | NSP12 :R1AB_CVHSA | |
2 | b | B 1 (B) | polymer(polypeptide(L)) [115 aa] | NSP8 :R1A_CVHSA | 270L 271L 273Y 274D 324T 326F 328P 329L 330V 331R 332K 338V 339P 340F 341V 368F 371L 372L 375A 378P 379A 380M 381H 382A 383A 384S 385G 386N 387L 388L 389L 390D 391K 392R 396F 398V 400A 402T 403N 405V 407F 505P 506F 509W 514L 515Y 517D 518S 523D (identity: 100.0 %/95.8 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:6nur_A_1 identity=95.8% |
queryA 117:QRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNW: 216 :******************************************************************** ************ ******************: 6nur_A_1 119:QRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQSLLKTVQFCDAMRDAGIVGVLTLDNQDLNGNW: 218 SecStr : SSBHHHHHHHHHT STT HHHHHHHHHTTSS GGGGGSTTTT SSSSTTHHHHHGGGHHHHHHHHHHHHHHHHHHHHTTEEEE GGGBBTT B: ExpBur :eeebebbbeebbebbbebeeeebeebeebbbebebbeeebbeeeebbbbbeeeebbebbeebbeebbebbbebbebbeebeeebeebbbbbebbbbebeb: queryA 217:YDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVL: 316 :****** * ** *** ****************** **** * ** ** *************** ***************** *****************: 6nur_A_1 219:YDFGDFVQVAPGCGVPIVDSYYSLLMPILTLTRALAAESHMDADLAKPLIKWDLLKYDFTEERLCLFDRYFKYWDQTYHPNCINCLDDRCILHCANFNVL: 318 SecStr : TT EE TT EEE HHHHHHHHHHHHHTTTTGGGGBTTS TTS B TT HHHHHHHHHHHSTT S SSGGG SSSHHHHHHHHHHHH: ExpBur :beeeebeeeeeeebebebbbbbbebbbbbbbbebbebbebeebeeeeeeeeeeeeeeebeeebeebbeebbebbeeebebbbeebeebbbbbbbbbbbbb: Contact : bb bb queryA 317:FSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFN: 416 :****************************************************************************************************: 6nur_A_1 319:FSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFN: 418 SecStr :HGGGS GGGSEEEEEEEEETTEEEEEEEEEEETTTEEEE S SBSS HHHHHHHHT THHHHTTSEE TT SS EEEES SS B EE : ExpBur :bbebbbeebbbebeeebebeeeeeebbbbbbbebbbbbebeeeeeeeeeeeeeeebbbebbbbebbeeeeebebeebebebebbeeeeeeeeebeeeeeb: Contact : b b bbbbb bbbb b bb b bbbbbbbbbbbbbbb b b b bb b b queryA 417:KDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYY: 516 :****************************************************************************************************: 6nur_A_1 419:KDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYY: 518 SecStr :HHHHHHHHTTTTT TT S B B GGGHHHHHGGGGG HHHHHHHHHHHHHTTTT GGG TTSB TTGGGT BHHHHH: ExpBur :eebeebbeeeebbeeeeebeeebebeebeeebbbebbbebebbeebbbbbbbbbbbbbbbeebbeebebbebebeebebeebeeebbbbbeeeeebeebb: Contact : bb b bb queryA 517:DSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMG: 616 :********************************************************************************************** *****: 6nur_A_1 519:DSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVETPHLMG: 618 SecStr :TTS HHHHHHHHHHTTTS EEEEEE BSS S EEEE HHHHHHHHHHHHHHHHHHHT SSSB S STTTHHHHHHHHHHTT SSEEEEE: ExpBur :eebeeeebeebbeebeebbbbbbbbbebeebebeeeebeeebbbbbbbbbbbbbbbbebbebbeeeeebbbbbebebeebbbbebbeebbeebeeeebbb: Contact :bb b queryA 617:WDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIA: 716 :************************** *** *********************************************************************: 6nur_A_1 619:WDYPKCDRAMPNMLRIMASLVLARKHNTCCNLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIA: 718 SecStr : TTHHHH HHHHHHHHHHHGGGTTSS HHHHHHHHHHHHHHHTS EEEETTEEEE S TTSSSHHHHHHHHHHHHHHHHHHHHHHTS GGG S: ExpBur :bebbebebbbbbbbbbbbbbbbbbebeeebeeeebbbbbbbbbbbbbbbbbbbebbbbebebbbbebbebbebbbbbbbbbbbbbbbbbbbbeeeeeebe: queryA 717:DKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQH: 816 :********************** ** ********************** ** ** *********** ********************************: 6nur_A_1 719:DKYVRNLQHRLYECLYRNRDVDHEFVDEFYAYLRKHFSMMILSDDAVVCYNSNYAAQGLVASIKNFKAVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQH: 818 SecStr : HHHHHHHHHHHTTTSS S HHHHHHHHHHHHHHEEEEEETTEEEEEEEHHHHTTTSS HHHHHHHHHHHTS GGG EE TTS S BTTBE: ExpBur :eeebeebbeebeebbbeeeeeeeebbeebeebbeebbbbbbebebbbbbbbbebbeebbbbebebbbbbbbbbbbbbbeeeebbeeeebeebbeebeebb: queryA 817:TMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYW: 916 :******************************************************************************* ***********: 6nur_A_1 819:TMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELXXXXXXXXXXMLTNDNTSRYW: 918 SecStr :EEEEE SSSEEEEEE HHHHHHHHHEE S SSS HHHHHHHHHHHHHHTGGGGGSS HHHHHHHHHHHHHHHHHHHH ---------- HHHHHGGG: ExpBur :bbebeeeeeebbbbbbebbebbbbbbbbeeebeeeeeebbeebbebbbebbbbeebeeeeebebbebbbebbeebeeee----------ebeeeebeebb: queryA 917:EPE: 919 :***: 6nur_A_1 919:EPE: 921 SecStr :S : ExpBur :eee: |