Protein Model on 8dz0 assembly_id=1
(TEMPLATE: 
8dz0
assembly_id:1
)Protein Model on 8dz0 assembly_id=1
(TEMPLATE: 8dz0
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | b(query A) |
| 1 | a | A 1 (A) | polymer(polypeptide(L)) [302 aa] | 3C-like proteinase nsp5 :R1AB_SARS2 | 1S 2G 3F 4R 5K 6M 7A 8F 9P 10S 11G 14E 122P 123S 124G 125V 126Y 137K 138G 139S 140F 141L 166E 172H 283G 285A 286L 290E 299Q 300C 303V 304T 305F 306Q (identity: 100.0 %/100.0 %) | |
| 2 | b | A(queryA) | B 1 (B) | polymer(polypeptide(L)) [306 aa] | 3C-like proteinase nsp5 :R1AB_SARS2 | |
| 3 | c | C 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | ||
| 4 | d | D 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | ||
| 5 | e | E 1 (A) | non-polymer(7YY) | 6-[(6-chloranyl-2-methyl-indazol-5-yl)amino]-3-[(1-methyl-1,2,4-triazol-3-yl)methyl]-1-[[2,4,5-tris(fluoranyl)phenyl]methyl]-1,3,5-triazine-2,4-dione | 1S (identity: 100.0 %/100.0 %) | |
| 6 | f | F 1 (B) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 52P 53N 54Y (identity: 100.0 %/100.0 %) | |
| 7 | g | G 1 (B) | non-polymer(7YY) | 6-[(6-chloranyl-2-methyl-indazol-5-yl)amino]-3-[(1-methyl-1,2,4-triazol-3-yl)methyl]-1-[[2,4,5-tris(fluoranyl)phenyl]methyl]-1,3,5-triazine-2,4-dione | 24T 25T 26T 27L 41H 140F 141L 142N 143G 144S 145C 163H 164H 165M 166E 172H 187D 188R (identity: 100.0 %/100.0 %) | |
| ALIGNMENTS |
| MODEL[2] Protein A "queryA" TEMPLATE:8dz0_B_1 identity=100.0% |
queryA 1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100
:****************************************************************************************************:
8dz0_B_1 1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100
SecStr : THHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG TTSTTS HHHHHHS SSSB EEETTEEE EEEEEEETTEEEEEESS TT E:
ExpBur :eebeeeebebeebeebbbbbbbeeeebbbbbbeebbbbbbebbbeeeebeeeebeebbeeeeeeebebebeeeebebeeeeeeebbbbbebeeebeeebe:
Contact :aaaaaaaaaaa a gggg g fff
Contact :e
queryA 101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI: 200
:****************************************************************************************************:
8dz0_B_1 101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI: 200
SecStr :EEE TT EEEEEEEETTEEEEEEEEE TTS B TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BSSS SSSS B :
ExpBur :eeeeebeebebbbbbbbeebeeeeeebbbbbbbebbeeebeeebebbbbbbbeeebbbbbbbbbbebeeebbbbbbbebebbeebebeeeebeeeeebbb:
Contact : aaaaa aaaaagggg ggga a gg
Contact : gg g g
queryA 201:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC: 300
:****************************************************************************************************:
8dz0_B_1 201:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC: 300
SecStr :HHHHHHHHHHHHHTT TT S HHHHHHHHHHTTB HHHHHHTHHHHHHHT TTHHHHHHHHHHHH TT BTTBSS HHHHHHHH:
ExpBur :bbbbbbbbbbbbeeeeeebeeeeebeeeebeeebeeeebeebeeeebeebeebbeebebebeebbbbbeebbeeebeeeebeeeeebebbbbbebbebbe:
Contact : a aa a aa
queryA 301:SGVTFQ: 306
:******:
8dz0_B_1 301:SGVTFQ: 306
SecStr :TT :
ExpBur :eeeebe:
Contact : aaaa
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