Protein Model on 7ntq assembly_id=1
(TEMPLATE: 
7ntq
assembly_id:1
)Protein Model on 7ntq assembly_id=1
(TEMPLATE: 7ntq
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [305 aa] | 3C-like proteinase :R1A_SARS2 | |
| 2 | b | A 2 (A) | polymer(polypeptide(L)) [305 aa] | 3C-like proteinase :R1A_SARS2 | 1S 2G 3F 4R 5K 6M 7A 8F 9P 10S 11G 14E 118Y 121S 122P 123S 124G 125V 126Y 127Q 137K 138G 139S 140F 141L 166E 170G 172H 280T 283G 285A 286L 290E 299Q 300C 301S 302G 303V 304T 305F (identity: 100.0 %/100.0 %) | |
| 3 | c | B 1 (A) | non-polymer(35J) | N-(pyridin-3-ylmethyl)thioformamide | 27L 41H 140F 141L 142N 143G 144S 145C 163H 164H 165M 166E (identity: 100.0 %/100.0 %) | |
| 4 | d | B 2 (A) | non-polymer(35J) | N-(pyridin-3-ylmethyl)thioformamide | ||
| 5 | e | C 1 (A) | non-polymer(NA) | SODIUM ION | 17M 115L 117C 147S 148V (identity: 100.0 %/100.0 %) | |
| 6 | f | C 2 (A) | non-polymer(NA) | SODIUM ION | ||
| 7 | g | D 1 (A) | non-polymer(NA) | SODIUM ION | 134F 173A 174G 182Y 185F (identity: 100.0 %/100.0 %) | |
| 8 | h | D 2 (A) | non-polymer(NA) | SODIUM ION | ||
| 9 | i | E 1 (A) | non-polymer(NA) | SODIUM ION | 203N 204V 207W 288E 289D 290E 291F (identity: 100.0 %/100.0 %) | |
| 10 | j | E 2 (A) | non-polymer(NA) | SODIUM ION | ||
| 11 | k | F 1 (A) | non-polymer(FMT) | FORMIC ACID | 2G 3F 282L 283G (identity: 100.0 %/100.0 %) | |
| 12 | l | F 2 (A) | non-polymer(FMT) | FORMIC ACID | ||
| 13 | m | G 1 (A) | non-polymer(FMT) | FORMIC ACID | 96P 97K 98T (identity: 100.0 %/100.0 %) | |
| 14 | n | G 2 (A) | non-polymer(FMT) | FORMIC ACID | ||
| 15 | o | H 1 (A) | non-polymer(FMT) | FORMIC ACID | 283G (identity: 100.0 %/100.0 %) | |
| 16 | p | H 2 (A) | non-polymer(FMT) | FORMIC ACID | 286L (identity: 100.0 %/100.0 %) | |
| 17 | q | I 1 (A) | non-polymer(FMT) | FORMIC ACID | 218W 279R (identity: 100.0 %/100.0 %) | |
| 18 | r | I 2 (A) | non-polymer(FMT) | FORMIC ACID | ||
| 19 | s | J 1 (A) | non-polymer(FMT) | FORMIC ACID | 25T 41H 49M (identity: 100.0 %/100.0 %) | |
| 20 | t | J 2 (A) | non-polymer(FMT) | FORMIC ACID | ||
| 21 | u | K 1 (A) | non-polymer(FMT) | FORMIC ACID | 100K 101Y (identity: 100.0 %/100.0 %) | |
| 22 | v | K 2 (A) | non-polymer(FMT) | FORMIC ACID | ||
| 23 | w | L 1 (A) | non-polymer(FMT) | FORMIC ACID | 64H 65N 67L (identity: 100.0 %/100.0 %) | |
| 24 | x | L 2 (A) | non-polymer(FMT) | FORMIC ACID | ||
| 25 | y | M 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 74Q 75L 76R (identity: 100.0 %/100.0 %) | |
| 26 | z | M 2 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | ||
| 27 | 1 | N 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 6M 7A 8F 127Q 298R (identity: 100.0 %/100.0 %) | |
| 28 | 2 | N 2 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 123S (identity: 100.0 %/100.0 %) | |
| 29 | 3 | O 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 14E 15G 16C 17M 18V 31W 70A 71G 97K (identity: 100.0 %/100.0 %) | |
| 30 | 4 | O 2 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | ||
| 31 | 5 | P 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 101Y 103F (identity: 100.0 %/100.0 %) | |
| 32 | 6 | P 2 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | ||
| 33 | 7 | Q 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 56D 59I 60R (identity: 100.0 %/100.0 %) | |
| 34 | 8 | Q 2 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | ||
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:7ntq_A_1 identity=100.0% |
queryA 1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100
:****************************************************************************************************:
7ntq_A_1 1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100
SecStr : HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG HHHHTS HHHHHHT GGGEEEEETTEEE EEEEEEETTEEEEEESS TT E:
ExpBur :eebeeeebebeebeebbbbbbbeeeebbbbbbeeebbbbebbbbeeebbeebebeeebeeeeeeebebebeeeebebeeeebeebbbebebeeebeeebe:
Contact :bbbbbbbbbbb b33e3 s c 3 c s 7 77 ww w 33 yyy mmm u
Contact : kk 111 3 3 s 3
queryA 101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI: 200
:****************************************************************************************************:
7ntq_A_1 101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI: 200
SecStr :EEE TT EEEEEEEETTEEEEEEEEE TTS B TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BSTT SSSS B :
ExpBur :eeeeebeebebbbbbbbbebeeeeeebbbbbbbebbeeebeeebbbbbbbbbeeebbbbbbbbbbebeeebbbbbbbebebbeebebeeeebeeeeebeb:
Contact :u 5 e eb bbbbbbb g bbbbbcccc ee cccb b bgg g g
Contact :5 2 1 cc c
queryA 201:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC: 300
:****************************************************************************************************:
7ntq_A_1 201:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC: 300
SecStr :HHHHHHHHHHHHHTT TT S HHHHHHHHHHTTB HHHHHHTHHHHHHHT HHHHHHHHHHHHHH TT BTTBSS HHHHHHHH:
ExpBur :bbbbbbbbbbbbeeeeeebeeeeebeeeebbebbeeeebeebeeeebeebeebbeebebebeebbbbbbbbbeeebeeeebeebeebebbbbbebbeeee:
Contact : ii i q qb kb bb iibi 1bb
Contact : k p i
Contact : o
queryA 301:SGVTF: 305
:*****:
7ntq_A_1 301:SGVTF: 305
SecStr :HT :
ExpBur :eeeee:
Contact :bbbbb
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