Protein Model on 7grx assembly_id=1
(TEMPLATE: 
7grx
assembly_id:1
)Protein Model on 7grx assembly_id=1
(TEMPLATE: 7grx
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | b(query A) |
| 1 | a | A 1 (A) | polymer(polypeptide(L)) [301 aa] | 3C-like proteinase nsp5 :R1AB_SARS2 | 1S 2G 4R 5K 6M 7A 8F 9P 10S 11G 14E 115L 122P 123S 124G 125V 126Y 127Q 137K 138G 139S 140F 141L 166E 170G 172H 283G 285A 286L 290E 299Q 301S 302G 303V 304T 305F 306Q (identity: 100.0 %/100.0 %) | |
| 2 | b | A(queryA) | B 1 (B) | polymer(polypeptide(L)) [306 aa] | 3C-like proteinase nsp5 :R1AB_SARS2 | |
| 3 | c | C 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 306Q (identity: 100.0 %/100.0 %) | |
| 4 | d | D 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 306Q (identity: 100.0 %/100.0 %) | |
| 5 | e | E 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 118Y 123S (identity: 100.0 %/100.0 %) | |
| 6 | f | F 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 123S (identity: 100.0 %/100.0 %) | |
| 7 | g | G 1 (A) | non-polymer(NA) | SODIUM ION | 306Q (identity: 100.0 %/100.0 %) | |
| 8 | h | H 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | ||
| 9 | i | I 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | ||
| 10 | j | J 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | ||
| 11 | k | K 1 (A) | non-polymer(CL) | CHLORIDE ION | 284S 285A 286L (identity: 100.0 %/100.0 %) | |
| 12 | l | L 1 (B) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 52P 53N 54Y (identity: 100.0 %/100.0 %) | |
| 13 | m | M 1 (B) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 6M 7A 8F 127Q 295D 298R (identity: 100.0 %/100.0 %) | |
| 14 | n | N 1 (B) | non-polymer(XZT) | 1-(2,4-difluorophenyl)pyrrolidine-2,5-dione | 165M 166E 167L 168P 189Q 190T 191A 192Q (identity: 100.0 %/100.0 %) | |
| 15 | o | O 1 (B) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 41H 49M 164H 165M 188R 189Q (identity: 100.0 %/100.0 %) | |
| 16 | p | P 1 (B) | non-polymer(NA) | SODIUM ION | 221N 223F 263D 266A (identity: 100.0 %/100.0 %) | |
| 17 | q | Q 1 (B) | non-polymer(CL) | CHLORIDE ION | 223F 224T (identity: 100.0 %/100.0 %) | |
| 18 | r | R 1 (B) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 140F 141L 142N 144S 145C 163H 165M 166E 172H (identity: 100.0 %/100.0 %) | |
| 19 | s | S 1 (B) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 15G 17M 18V 31W 70A (identity: 100.0 %/100.0 %) | |
| ALIGNMENTS |
| MODEL[2] Protein A "queryA" TEMPLATE:7grx_B_1 identity=100.0% |
queryA 1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100
:****************************************************************************************************:
7grx_B_1 1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100
SecStr : HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG TTGGGS HHHHHHT GGGEEEEETTEEE EEEEEEETTEEEEEESS TT S:
ExpBur :eebeeeebebeebeebbbbbbbeeeebbbbbbeebbbbbebbbbeeebbeebebeebbeeeeeeebebebeeeebebeeeeeeebbbebebeeebeebbe:
Contact :aa aaaaaaaa as ss s o o lll s
Contact : mmm
queryA 101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI: 200
:****************************************************************************************************:
7grx_B_1 101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI: 200
SecStr :EEE TT EEEEEEEETTEEEEEEEEE TTS B TT TT EEEEESSS EEEEEEEEEE TTS EEEE TTS BSSS SSSS B :
ExpBur :eeeeebeebebbbbbbbeebeeeeeebbbbbbbebbeeebeeebbbbbbbbbeeebbbbbbbbbbebeeebbbbbbbebebbeebebeeeebeeeeebeb:
Contact : a e aaaaaa aaaaar rr ronann a a onnnn
Contact : e m rr on r o
Contact : f rr
queryA 201:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC: 300
:****************************************************************************************************:
7grx_B_1 201:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC: 300
SecStr :HHHHHHHHHHHHHTT TT S HHHHHHHHHHTTB HHHHHHTHHHHHHHS HHHHHHHHHHHHHH TT BTTBSS HHHHHHHT:
ExpBur :bbbbbbbbbbbbeeeeeebeeeeebeeeebbebbeeeebeebeeeebeebeebeeebebebeebbbbbbebbeeebeeeebeeeeebebbbbbebbeeee:
Contact : p pq p p akaa a m ma
Contact : q kk
queryA 301:SGVTFQ: 306
:******:
7grx_B_1 301:SGVTFQ: 306
SecStr :TT :
ExpBur :eeeebe:
Contact :aaaaaa
Contact : c
Contact : d
Contact : g
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