Protein Model on 7grp assembly_id=1
(TEMPLATE: 
7grp
assembly_id:1
)Protein Model on 7grp assembly_id=1
(TEMPLATE: 7grp
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [305 aa] | 3C-like proteinase nsp5 :R1AB_SARS2 | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [305 aa] | 3C-like proteinase nsp5 :R1AB_SARS2 | 1S 2G 4R 5K 6M 7A 8F 9P 10S 11G 14E 115L 122P 123S 124G 125V 126Y 127Q 137K 138G 139S 140F 141L 166E 170G 172H 283G 285A 286L 290E 299Q 300C 301S 302G 303V 304T 305F (identity: 100.0 %/100.0 %) | |
| 3 | c | C 1 (A) | non-polymer(VXQ) | 1-(2,3-dihydro-1-benzofuran-5-yl)methanamine | 41H 44C 49M 54Y 165M 186V 187D 188R 189Q 192Q (identity: 100.0 %/100.0 %) | |
| 4 | d | D 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 40R 52P 53N 54Y (identity: 100.0 %/100.0 %) | |
| 5 | e | E 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 6M 8F 127Q 295D 298R (identity: 100.0 %/100.0 %) | |
| 6 | f | F 1 (A) | non-polymer(NA) | SODIUM ION | 221N 223F 263D 266A (identity: 100.0 %/100.0 %) | |
| 7 | g | G 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 140F 141L 142N 144S 145C 163H 165M 166E 172H (identity: 100.0 %/100.0 %) | |
| 8 | h | H 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 15G 17M 18V 31W 70A 97K (identity: 100.0 %/100.0 %) | |
| 9 | i | I 1 (B) | non-polymer(DMS) | DIMETHYL SULFOXIDE | ||
| 10 | j | J 1 (B) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 123S (identity: 100.0 %/100.0 %) | |
| 11 | k | K 1 (B) | non-polymer(DMS) | DIMETHYL SULFOXIDE | ||
| 12 | l | L 1 (B) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 116A 118Y 123S 141L (identity: 100.0 %/100.0 %) | |
| 13 | m | M 1 (B) | non-polymer(CL) | CHLORIDE ION | ||
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:7grp_A_1 identity=100.0% |
queryA 1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100
:****************************************************************************************************:
7grp_A_1 1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100
SecStr : HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG TTGGGS HHHHHHT GGGEEEEETTEEE EEEEEEETTEEEEEESS TT S:
ExpBur :eebeeeebebeebeebbbbbbbeeeebbbbbbeebbbbbbebbbeeeeeeebebeebbeeeeeeebebebeeeebebeeeeeeebbbebebeeebeeebe:
Contact :bb bbbbbbbb bh hh h dc c c ddc h h
Contact : e e d
queryA 101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI: 200
:****************************************************************************************************:
7grp_A_1 101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI: 200
SecStr :EEE TT EEEEEEEETTEEEEEEEEE TTS B TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BSSS SSSS B :
ExpBur :eeeeebeebebbbbbbbeebeeeeeebbbbbbbebbeeebeeebbbbbbbbbeeebbbbbbbbbbebeeebbbbbbbebebbeebebeeeebeeeeebeb:
Contact : bl l bbbbbb bbbbbg gg g cb b b cccc c
Contact : j e gg gg g
Contact : l l
queryA 201:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC: 300
:****************************************************************************************************:
7grp_A_1 201:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC: 300
SecStr :HHHHHHHHHHHHHTT TT S HHHHHHHHHHTTB HHHHHHTHHHHHHHT HHHHHHHHHHHHHH TT BTTBSS HHHHHHHT:
ExpBur :bbbbbbbbbbbbeeeeeebeeeeebebeebeebbeeeebeebeeeebeebeebeeebebebeebbbbbbebbeeebeeeebeeeeeeebbbbbebbeeee:
Contact : f f f f b bb b e ebb
queryA 301:SGVTF: 305
:*****:
7grp_A_1 301:SGVTF: 305
SecStr :TT :
ExpBur :eeeee:
Contact :bbbbb
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