#WARNING:no index is registered index "YP_009725301.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725301.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 7gn7 assembly_id=1

Protein Model on 7gn7 assembly_id=1 (TEMPLATE: 7gn7 assembly_id:1 )

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) A 1 (A) polymer(polypeptide(L)) [305 aa] 3C-like proteinase :R1AB_SARS2
2 b B 1 (B) polymer(polypeptide(L)) [305 aa] 3C-like proteinase :R1AB_SARS2 1S 2G 3F 4R 5K 6M 7A 8F 9P 10S 11G 14E 118Y 121S 122P 123S 124G 125V 126Y 127Q 128C 137K 138G 139S 140F 141L 166E 170G 172H 283G 285A 286L 290E 298R 299Q 301S (identity: 100.0 %/100.0 %)
3 c C 1 (A) non-polymer(DMS) DIMETHYL SULFOXIDE 14E 15G 17M 31W 97K (identity: 100.0 %/100.0 %)
4 d D 1 (A) non-polymer(DMS) DIMETHYL SULFOXIDE 165M 166E 188R 190T 192Q (identity: 100.0 %/100.0 %)
5 e E 1 (A) non-polymer(DMS) DIMETHYL SULFOXIDE 6M 8F 127Q 295D 298R (identity: 100.0 %/100.0 %)
6 f F 1 (A) non-polymer(DMS) DIMETHYL SULFOXIDE 19Q 69Q 70A 71G 119N 120G (identity: 100.0 %/100.0 %)
7 g G 1 (A) non-polymer(DMS) DIMETHYL SULFOXIDE 105R 180N (identity: 100.0 %/100.0 %)
8 h H 1 (A) non-polymer(CL) CHLORIDE ION 106I 107Q 110Q (identity: 100.0 %/100.0 %)
9 i I 1 (A) non-polymer(RV0) (4S)-6-chloro-4-ethyl-N-(isoquinolin-4-yl)-1,1-dioxo-1,2,3,4-tetrahydro-1lambda~6~,2-benzothiazine-4-carboxamide 41H 49M 140F 141L 142N 144S 145C 163H 164H 165M 166E 187D 188R 189Q (identity: 100.0 %/100.0 %)
10 j J 1 (B) non-polymer(DMS) DIMETHYL SULFOXIDE 6M 298R 299Q (identity: 100.0 %/100.0 %)
11 k K 1 (B) non-polymer(DMS) DIMETHYL SULFOXIDE 123S (identity: 100.0 %/100.0 %)
12 l L 1 (B) non-polymer(DMS) DIMETHYL SULFOXIDE 137K (identity: 100.0 %/100.0 %)
13 m M 1 (B) non-polymer(DMS) DIMETHYL SULFOXIDE 5K 7A 125V 127Q (identity: 100.0 %/100.0 %)
14 n N 1 (B) non-polymer(DMS) DIMETHYL SULFOXIDE
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7gn7_A_1 identity=100.0%
queryA         1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100
                :****************************************************************************************************:
7gn7_A_1       1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100
SecStr          :         THHHHTTEEEEEETTEEEEEEEETTEEEEEGGGS  TTGGGS  HHHHHTT  GGG EEEETTEEE EEEEEEETTEEEEEESS  TT  E:    
ExpBur          :eebeeeebebeebeebbbbbbbeeeebbbbbbeebbbbbbbbbbeeeebeebebeebbeeeeeeebebebeeeebebeeeeeeebbbebebeeebeeebe:    
Contact         :bbbbbbbbbbb  bc c f           c         i       i                   fff                         c   
Contact         :    meme     c                                                                                      
Contact         :     j                                                                                              

queryA       101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI: 200
                :****************************************************************************************************:
7gn7_A_1     101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI: 200
SecStr          :EEE    TT EEEEEEEETTEEEEEEEEE  TTS B     TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BSSS  SS S        B :    
ExpBur          :eeeeebeebebbbbbbbeebeeeeeebbbbbbbebbeeebeeebbbbbbbbbeeebbbbbbbbbbebeeebbbbbbbebebbeebebeeeebeeeeebeb:    
Contact         :    ghh  h       bffbbbbbbbb        bbbbbi ii                 iidb   b b       g      idid d        
Contact         :                      k m e         l  ii                       id                     i            
Contact         :                          m                                      i                                  

queryA       201:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC: 300
                :****************************************************************************************************:
7gn7_A_1     201:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC: 300
SecStr          :HHHHHHHHHHHHHTT  TT  S    HHHHHHHHHHTTB    HHHHHHTHHHHHHHT  HHHHHHHHHHHHHH  TT  BTTBSS      HHHHHHHS:    
ExpBur          :bbbbbbbbbbbbbeeeeebbeeeebebeebbeebeeeebeebeeeebeebeebeeebebebeebbbbbeebbeeebeeeebeebeebebbbbbebbeeeb:    
Contact         :                                                                                  b bb   b    e  bb 
Contact         :                                                                                                 ej 
Contact         :                                                                                                 j  

queryA       301:SGVTF: 305
                :*****:
7gn7_A_1     301:SGVTF: 305
SecStr          : S   :    
ExpBur          :eeeee:    
Contact         :b                                                                                                   


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