Protein Model on 7gji assembly_id=1
(TEMPLATE: 
7gji
assembly_id:1
)Protein Model on 7gji assembly_id=1
(TEMPLATE: 7gji
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [305 aa] | 3C-like proteinase :R1AB_SARS2 | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [305 aa] | 3C-like proteinase :R1AB_SARS2 | 1S 2G 4R 5K 6M 7A 8F 9P 10S 11G 14E 118Y 121S 122P 123S 124G 125V 126Y 127Q 137K 138G 139S 140F 141L 166E 170G 172H 280T 283G 285A 286L 290E 298R 299Q 301S (identity: 100.0 %/100.0 %) | |
| 3 | c | C 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 14E 15G 17M 18V 31W 70A 71G (identity: 100.0 %/100.0 %) | |
| 4 | d | D 1 (A) | non-polymer(QO0) | (4S)-6,7-dichloro-N-(isoquinolin-4-yl)-4-methoxy-3,4-dihydro-2H-1-benzopyran-4-carboxamide | 41H 49M 140F 141L 142N 144S 145C 163H 164H 165M 166E 186V 187D 188R 189Q (identity: 100.0 %/100.0 %) | |
| 5 | e | E 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 25T 41H 44C 45T 46S 49M (identity: 100.0 %/100.0 %) | |
| 6 | f | F 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 166E (identity: 100.0 %/100.0 %) | |
| 7 | g | G 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 17M 18V 19Q 69Q 71G 119N 120G 121S (identity: 100.0 %/100.0 %) | |
| 8 | h | H 1 (A) | non-polymer(CL) | CHLORIDE ION | 106I 107Q 110Q (identity: 100.0 %/100.0 %) | |
| 9 | i | I 1 (B) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 6M 298R 299Q (identity: 100.0 %/100.0 %) | |
| 10 | j | J 1 (B) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 123S (identity: 100.0 %/100.0 %) | |
| 11 | k | K 1 (B) | non-polymer(DMS) | DIMETHYL SULFOXIDE | ||
| 12 | l | L 1 (B) | non-polymer(QO0) | (4S)-6,7-dichloro-N-(isoquinolin-4-yl)-4-methoxy-3,4-dihydro-2H-1-benzopyran-4-carboxamide | ||
| 13 | m | M 1 (B) | non-polymer(DMS) | DIMETHYL SULFOXIDE | ||
| 14 | n | N 1 (B) | non-polymer(DMS) | DIMETHYL SULFOXIDE | ||
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:7gji_A_1 identity=100.0% |
queryA 1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100
:****************************************************************************************************:
7gji_A_1 1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100
SecStr : HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG TTGGGS HHHHHHT GGGEEEEETTEEE EEEEEEETTEEEEEESS TT E:
ExpBur :eebeeeebebeebeebbbbbbbeeeebbbbbbeebbbbbbbbbbeeeebeebebeebbeeeeeeebebebeeeebebeeeeeeebbbebebeeebeebbe:
Contact :bb bbbbbbbb bc ccg e c d eee d gcc
Contact : i c gg e e g
queryA 101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI: 200
:****************************************************************************************************:
7gji_A_1 101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI: 200
SecStr :EEE TT EEEEEEEETTEEEEEEEEE TTS B TT TT EEEE STTEEEEEEEEEEE TTS EEEE TTS BSTT SS S B :
ExpBur :eeeeebeebebbbbbbbeebeeeeeebbbbbbbebbeeebeeebbbbbbbbbeeebbbbbbbbbbebeeebbbbbbbebebbeebebeeeebeeeeebeb:
Contact : hh h bggbbbbbbb bbbbbd dd dddb b b dddd
Contact : g j dd d
Contact : f
queryA 201:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC: 300
:****************************************************************************************************:
7gji_A_1 201:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC: 300
SecStr :HHHHHHHHHHHHHTT TT S HHHHHHHHHHTTB HHHHHHTHHHHHHHT HHHHHHHHHHHHHH TT BTTBSS S HHHHHHHS:
ExpBur :bbbbbbbbbbbbbbeeeebbeeeebeeeebbeebeeeebeebeeeebeebeebbeebebebeebbbbbeebbeeebeeeebeebeebebbbbbebbeeeb:
Contact : b b bb b bb
Contact : ii
queryA 301:SGVTF: 305
:*****:
7gji_A_1 301:SGVTF: 305
SecStr : SS :
ExpBur :eeeee:
Contact :b
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