Protein Model on 7giy assembly_id=1
(TEMPLATE: 
7giy
assembly_id:1
)Protein Model on 7giy assembly_id=1
(TEMPLATE: 7giy
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | b(query A) |
| 1 | a | A 1 (A) | polymer(polypeptide(L)) [301 aa] | 3C-like proteinase :R1AB_SARS2 | 1S 2G 4R 5K 6M 7A 8F 9P 10S 11G 14E 115L 122P 123S 124G 125V 126Y 127Q 128C 137K 138G 139S 140F 141L 166E 172H 280T 283G 285A 286L 290E 299Q 300C 301S 302G 303V 304T 305F (identity: 100.0 %/100.0 %) | |
| 2 | b | A(queryA) | B 1 (B) | polymer(polypeptide(L)) [305 aa] | 3C-like proteinase :R1AB_SARS2 | |
| 3 | c | C 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 118Y 123S (identity: 100.0 %/100.0 %) | |
| 4 | d | D 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | ||
| 5 | e | E 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | ||
| 6 | f | F 1 (A) | non-polymer(OI4) | (4R)-6-chloro-N-(4-methylpyridin-3-yl)-3,4-dihydro-2H-1-benzopyran-4-carboxamide | ||
| 7 | g | G 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | ||
| 8 | h | H 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 123S (identity: 100.0 %/100.0 %) | |
| 9 | i | I 1 (B) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 6M 8F 127Q 295D 298R (identity: 100.0 %/100.0 %) | |
| 10 | j | J 1 (B) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 2G 3F 4R 282L 283G (identity: 100.0 %/100.0 %) | |
| 11 | k | K 1 (B) | non-polymer(OI4) | (4R)-6-chloro-N-(4-methylpyridin-3-yl)-3,4-dihydro-2H-1-benzopyran-4-carboxamide | 41H 49M 140F 141L 142N 144S 145C 163H 164H 165M 166E 187D 188R 189Q (identity: 100.0 %/100.0 %) | |
| 12 | l | L 1 (B) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 5K 7A 125V 126Y 127Q (identity: 100.0 %/100.0 %) | |
| 13 | m | M 1 (B) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 14E 15G 17M 18V 31W 70A 97K (identity: 100.0 %/100.0 %) | |
| 14 | n | N 1 (B) | non-polymer(CL) | CHLORIDE ION | 249I 252P 297V (identity: 100.0 %/100.0 %) | |
| ALIGNMENTS |
| MODEL[2] Protein A "queryA" TEMPLATE:7giy_B_1 identity=100.0% |
queryA 1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100
:****************************************************************************************************:
7giy_B_1 1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100
SecStr : HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG HHHHHS HHHHHHT GGGEEEEETTEEE EEEEEEETTEEEEEESS TT E:
ExpBur :eebeeeebebeebeebbbbbbbeeeebbbbbbeebbbbbbbbbbeeeeeeebebeebbeeeeeeebebebeeeebebeeeeeeebbbebebeeebeeebe:
Contact :aajaaaaaaaa am mm m k k m m
Contact : j jlili m
queryA 101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI: 200
:****************************************************************************************************:
7giy_B_1 101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI: 200
SecStr :EEE TT EEEEEEEETTEEEEEEEEE TTS B TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BSSS SSSS B :
ExpBur :eeeeebeebebbbbbbbeebeeeeeebbbbbbbebbeeebeebbbbbbbbbbeeebbbbbbbbbbebeeebbbbbbbebebbeebebeeeebeeeeebeb:
Contact : a c aaaaaaa aaaaak kk kkka a kkk
Contact : c lli kk k
Contact : h l
queryA 201:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC: 300
:****************************************************************************************************:
7giy_B_1 201:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC: 300
SecStr :HHHHHHHHHHHHHTT TT S HHHHHHHHHHTTB HHHHHHHHHHHHHHT HHHHHHHHHHHHHH TT BTTBSS HHHHHHHH:
ExpBur :bbbbbbbbbbbbeeeeeebbeeeebeeeebeebbeeeebeebeeeebeebeebeeebebebeebbbbbbebbeeebeeeebeeeeebebbbbbebbeeee:
Contact : n n a ja aa a i niaa
Contact : j
queryA 301:SGVTF: 305
:*****:
7giy_B_1 301:SGVTF: 305
SecStr :HT :
ExpBur :eeeee:
Contact :aaaaa
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