Protein Model on 7gi4 assembly_id=1
(TEMPLATE: 
7gi4
assembly_id:1
)Protein Model on 7gi4 assembly_id=1
(TEMPLATE: 7gi4
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | b(query A) |
| 1 | a | A 1 (A) | polymer(polypeptide(L)) [300 aa] | 3C-like proteinase :R1AB_SARS2 | 1S 2G 4R 5K 6M 7A 8F 9P 10S 11G 14E 115L 122P 123S 124G 125V 126Y 127Q 128C 137K 138G 139S 140F 141L 166E 170G 172H 280T 283G 285A 286L 290E 299Q 300C 301S 302G 303V 304T 305F (identity: 100.0 %/100.0 %) | |
| 2 | b | A(queryA) | B 1 (B) | polymer(polypeptide(L)) [305 aa] | 3C-like proteinase :R1AB_SARS2 | |
| 3 | c | C 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | ||
| 4 | d | D 1 (A) | non-polymer(QCC) | 2-(3-chloro-5-{[(2S)-4-oxoazetidin-2-yl]oxy}phenyl)-N-(4-methylpyridin-3-yl)acetamide | ||
| 5 | e | E 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | ||
| 6 | f | F 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 123S (identity: 100.0 %/100.0 %) | |
| 7 | g | G 1 (B) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 118Y 123S 141L (identity: 100.0 %/100.0 %) | |
| 8 | h | H 1 (B) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 6M 8F 127Q 295D 298R (identity: 100.0 %/100.0 %) | |
| 9 | i | I 1 (B) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 2G 3F 4R 282L (identity: 100.0 %/100.0 %) | |
| 10 | j | J 1 (B) | non-polymer(QCC) | 2-(3-chloro-5-{[(2S)-4-oxoazetidin-2-yl]oxy}phenyl)-N-(4-methylpyridin-3-yl)acetamide | 41H 49M 140F 141L 142N 144S 145C 163H 164H 165M 166E 167L 168P 187D 188R 189Q 190T 192Q (identity: 100.0 %/100.0 %) | |
| 11 | k | K 1 (B) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 52P 53N 54Y (identity: 100.0 %/100.0 %) | |
| 12 | l | L 1 (B) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 5K 7A 125V 126Y 127Q (identity: 100.0 %/100.0 %) | |
| 13 | m | M 1 (B) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 14E 15G 17M 18V 31W 70A (identity: 100.0 %/100.0 %) | |
| 14 | n | N 1 (B) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 101Y 102K 156C (identity: 100.0 %/100.0 %) | |
| 15 | o | O 1 (B) | non-polymer(CL) | CHLORIDE ION | ||
| ALIGNMENTS |
| MODEL[2] Protein A "queryA" TEMPLATE:7gi4_B_1 identity=100.0% |
queryA 1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100
:****************************************************************************************************:
7gi4_B_1 1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100
SecStr : HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG TTGGGS HHHHHHT GGGEEEEETTEEE EEEEEEETTEEEEEESS TT S:
ExpBur :eebeeeebebeebeebbbbbbbeeeebbbbbbeebbbbbbbbbbeeeebeebebeebbeeeeeeebebebeeeebebeeeeeeebbbebebeeebeeebe:
Contact :aaiaaaaaaaa am mm m j j kkk m
Contact : i ilhlh m
queryA 101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI: 200
:****************************************************************************************************:
7gi4_B_1 101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI: 200
SecStr :EEE TT EEEEEEEETTEEEEEEEEE TTS B TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BSSS SSSS B :
ExpBur :eeeeebeebebbbbbbbeebeeeeeebbbbbbbebbeeebeeebbbbbbbbbeeebbbbbbbbbbebeeebbbbbbbebebbeebebeeeebeeeeebeb:
Contact :nn a g aaaaaaa aaaaaj jj n jjjajj a a jjjj j
Contact : f llh jg j
Contact : g l j
queryA 201:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC: 300
:****************************************************************************************************:
7gi4_B_1 201:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC: 300
SecStr :HHHHHHHHHHHHHTT TT S HHHHHHHHHHTTB HHHHHHTHHHHHHHT HHHHHHHHHHHHHH TT BTTBSS S HHHHHHHH:
ExpBur :bbbbbbbbbbbbeeeeeebeeeeebeeeebeebbeeeebeebeeeebeebeebbeebebebeebbbbbbebbeeebeeeebeeeeebebbbbbebbeebe:
Contact : a ia aa a h haa
queryA 301:SGVTF: 305
:*****:
7gi4_B_1 301:SGVTF: 305
SecStr :HT :
ExpBur :eeeee:
Contact :aaaaa
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