Protein Model on 7gi0 assembly_id=1
(TEMPLATE: 
7gi0
assembly_id:1
)Protein Model on 7gi0 assembly_id=1
(TEMPLATE: 7gi0
assembly_id:1
)| CurrentView:JAVA Change to:[HTML5] |
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | b(query A) |
| 1 | a | A 1 (A) | polymer(polypeptide(L)) [305 aa] | 3C-like proteinase :R1AB_SARS2 | 1S 2G 4R 5K 6M 7A 8F 9P 10S 11G 14E 115L 122P 123S 124G 125V 126Y 127Q 137K 138G 139S 140F 141L 166E 170G 172H 280T 283G 285A 286L 290E 299Q 300C 301S 302G 303V 304T 305F (identity: 100.0 %/100.0 %) | |
| 2 | b | A(queryA) | B 1 (B) | polymer(polypeptide(L)) [305 aa] | 3C-like proteinase :R1AB_SARS2 | |
| 3 | c | C 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | ||
| 4 | d | D 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | ||
| 5 | e | E 1 (A) | non-polymer(OQL) | (4R)-6-chloro-N-(isoquinolin-4-yl)-1,2,3,4-tetrahydroquinoline-4-carboxamide | ||
| 6 | f | F 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | ||
| 7 | g | G 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | ||
| 8 | h | H 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | ||
| 9 | i | I 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | ||
| 10 | j | J 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 123S (identity: 100.0 %/100.0 %) | |
| 11 | k | K 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | ||
| 12 | l | L 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | ||
| 13 | m | M 1 (A) | non-polymer(CL) | CHLORIDE ION | ||
| 14 | n | N 1 (B) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 116A 118Y 123S (identity: 100.0 %/100.0 %) | |
| 15 | o | O 1 (B) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 6M 7A 8F 127Q 295D 298R (identity: 100.0 %/100.0 %) | |
| 16 | p | P 1 (B) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 2G 3F 282L 283G (identity: 100.0 %/100.0 %) | |
| 17 | q | Q 1 (B) | non-polymer(OQL) | (4R)-6-chloro-N-(isoquinolin-4-yl)-1,2,3,4-tetrahydroquinoline-4-carboxamide | 41H 49M 140F 141L 142N 144S 145C 163H 164H 165M 166E 187D 188R 189Q (identity: 100.0 %/100.0 %) | |
| 18 | r | R 1 (B) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 165M 166E 168P 188R 189Q 190T 192Q (identity: 100.0 %/100.0 %) | |
| 19 | s | S 1 (B) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 25T 41H 44C 46S 49M (identity: 100.0 %/100.0 %) | |
| 20 | t | T 1 (B) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 166E (identity: 100.0 %/100.0 %) | |
| 21 | u | U 1 (B) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 14E 15G 17M 18V 31W 71G (identity: 100.0 %/100.0 %) | |
| 22 | v | V 1 (B) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 271L 275G 276M 285A 287L (identity: 100.0 %/100.0 %) | |
| 23 | w | W 1 (B) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 235M 236K 238N (identity: 100.0 %/100.0 %) | |
| 24 | x | X 1 (B) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 22C 23G 24T 25T 44C 45T 61K (identity: 100.0 %/100.0 %) | |
| 25 | y | Y 1 (B) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 105R 180N 181F (identity: 100.0 %/100.0 %) | |
| ALIGNMENTS |
| MODEL[2] Protein A "queryA" TEMPLATE:7gi0_B_1 identity=100.0% |
queryA 1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100
:****************************************************************************************************:
7gi0_B_1 1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100
SecStr : HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG HHHHTS HHHHHHT GGGEEEEETTEEE EEEEEEETTEEEEEESS TT S:
ExpBur :eebeeeebebeebeebbbbbbbeeeebbbbbbeebbbbbebbbbeeeebeebebeebbeeeeeeebebebeeeebebeeeeeeebbbebebeeebeeebe:
Contact :aapaaaaaaaa au uu xxxs u q sxs q x u
Contact : p ooo u x s x s
queryA 101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI: 200
:****************************************************************************************************:
7gi0_B_1 101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI: 200
SecStr :EEE TT EEEEEEEETTEEEEEEEEE TTS B TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BSSS SSSS B :
ExpBur :eeeeebeebebbbbbbbeebeeeeeebbbbbbbebbeeebeeebbbbbbbbbeeebbbbbbbbbbebeeebbbbbbbebebbeebebeeeebeeeeebeb:
Contact : y an n aaaaaa aaaaaq qq qqqa r a a yy qqqr r
Contact : j o qq rq rr
Contact : n r
Contact : t
queryA 201:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC: 300
:****************************************************************************************************:
7gi0_B_1 201:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC: 300
SecStr :HHHHHHHHHHHHHTT TT S HHHHHHHHHHTTB HHHHHHTHHHHHHHT HHHHHHHHHHHHHH TT BTTBSS S HHHHHHHH:
ExpBur :bbbbbbbbbbbbeeeeeebbeeeebeeeebeebbeeeebeebeeeebeebeebbeebebebeebbbbbbebbeeebeeeebeeeeebebbbbbebbeeee:
Contact : ww w v vv a pa aav a o oaa
Contact : p v
queryA 301:SGVTF: 305
:*****:
7gi0_B_1 301:SGVTF: 305
SecStr :HT :
ExpBur :eeeee:
Contact :aaaaa
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