Protein Model on 7ghu assembly_id=1
(TEMPLATE: 
7ghu
assembly_id:1
)Protein Model on 7ghu assembly_id=1
(TEMPLATE: 7ghu
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | b(query A) |
| 1 | a | A 1 (A) | polymer(polypeptide(L)) [300 aa] | 3C-like proteinase :R1AB_SARS2 | 1S 2G 4R 5K 6M 7A 8F 9P 10S 11G 14E 115L 122P 123S 124G 125V 126Y 127Q 137K 138G 139S 140F 141L 166E 170G 172H 280T 283G 285A 286L 290E 299Q 300C 301S 302G 303V 304T 305F (identity: 100.0 %/100.0 %) | |
| 2 | b | A(queryA) | B 1 (B) | polymer(polypeptide(L)) [305 aa] | 3C-like proteinase :R1AB_SARS2 | |
| 3 | c | C 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 118Y 123S 141L (identity: 100.0 %/100.0 %) | |
| 4 | d | D 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | ||
| 5 | e | E 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | ||
| 6 | f | F 1 (A) | non-polymer(P4R) | (1'M,4S)-6-chloro-1'-(isoquinolin-4-yl)-2,3-dihydrospiro[[1]benzopyran-4,4'-imidazolidine]-2',5'-dione | ||
| 7 | g | G 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | ||
| 8 | h | H 1 (A) | non-polymer(CL) | CHLORIDE ION | ||
| 9 | i | I 1 (B) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 6M 7A 8F 127Q 295D 298R (identity: 100.0 %/100.0 %) | |
| 10 | j | J 1 (B) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 2G 3F 4R 282L 283G (identity: 100.0 %/100.0 %) | |
| 11 | k | K 1 (B) | non-polymer(P4R) | (1'M,4S)-6-chloro-1'-(isoquinolin-4-yl)-2,3-dihydrospiro[[1]benzopyran-4,4'-imidazolidine]-2',5'-dione | 41H 49M 140F 141L 142N 144S 145C 163H 164H 165M 166E 187D 188R 189Q (identity: 100.0 %/100.0 %) | |
| 12 | l | L 1 (B) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 52P 53N 54Y (identity: 100.0 %/100.0 %) | |
| ALIGNMENTS |
| MODEL[2] Protein A "queryA" TEMPLATE:7ghu_B_1 identity=100.0% |
queryA 1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100
:****************************************************************************************************:
7ghu_B_1 1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100
SecStr : HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG HHHHTS HHHHHHT GGGEEEEETTEEE EEEEEEETTEEEEEESS TT S:
ExpBur :eebeeeebebeebeebbbbbbbeeeebbbbbbeebbbbbebbbbeeeebeebebeebbeeeeeeebebebeeeebebeeeeeeebbbebebeeebeeebe:
Contact :aajaaaaaaaa a k k lll
Contact : j j iii
queryA 101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI: 200
:****************************************************************************************************:
7ghu_B_1 101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI: 200
SecStr :EEE TT EEEEEEEETTEEEEEEEEE TTS B TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BSSS SSSS B :
ExpBur :eeeeebeebebbbbbbbeebeeeeeebbbbbbbebbeeebeeebbbbbbbbbeeebbbbbbbbbbebeeebbbbbbbebebbeebebeeeebeeeeebeb:
Contact : a c aaaaaa aaaaak kk kkka a a kkk
Contact : c i kc k
Contact : k
queryA 201:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC: 300
:****************************************************************************************************:
7ghu_B_1 201:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC: 300
SecStr :HHHHHHHHHHHHHTT TT S HHHHHHHHHHTTB HHHHHHTHHHHHHHS HHHHHHHHHHHHHH TT BTTBSS HHHHHHHH:
ExpBur :bbbbbbbbbbbbeeeeeebbeeeebeeeebeebbeeeebeebeeeebeebeebeeebebebeebbbbbbebbeeebeeeebeeeeebebbbbbebbeebe:
Contact : a ja aa a i iaa
Contact : j
queryA 301:SGVTF: 305
:*****:
7ghu_B_1 301:SGVTF: 305
SecStr :HT :
ExpBur :eeeee:
Contact :aaaaa
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