Protein Model on 7bgp assembly_id=1
(TEMPLATE: 
7bgp
assembly_id:1
)Protein Model on 7bgp assembly_id=1
(TEMPLATE: 7bgp
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | b(query A) |
| 1 | a | A 1 (A) | polymer(polypeptide(L)) [301 aa] | 3C-like proteinase :R1AB_SARS2 | 1S 2G 4R 5K 6M 7A 8F 9P 10S 11G 14E 115L 122P 123S 124G 125V 126Y 127Q 128C 137K 138G 139S 140F 141L 166E 170G 172H 283G 285A 286L 290E 299Q 300C 301S 302G 303V 304T 305F (identity: 100.0 %/100.0 %) | |
| 2 | b | A(queryA) | B 1 (B) | polymer(polypeptide(L)) [305 aa] | 3C-like proteinase :R1AB_SARS2 | |
| 3 | c | C 1 (A) | non-polymer(EDO) | 1,2-ETHANEDIOL | ||
| 4 | d | D 1 (A) | non-polymer(ALD) | N-[(benzyloxy)carbonyl]-L-leucyl-N-[(2S)-1-hydroxy-4-methylpentan-2-yl]-L-leucinamide | ||
| 5 | e | E 1 (A) | non-polymer(CL) | CHLORIDE ION | ||
| 6 | f | F 1 (A) | non-polymer(EDO) | 1,2-ETHANEDIOL | ||
| 7 | g | G 1 (A) | non-polymer(EDO) | 1,2-ETHANEDIOL | ||
| 8 | h | H 1 (A) | non-polymer(EDO) | 1,2-ETHANEDIOL | ||
| 9 | i | I 1 (A) | non-polymer(EDO) | 1,2-ETHANEDIOL | 118Y 123S (identity: 100.0 %/100.0 %) | |
| 10 | j | J 1 (A) | non-polymer(EDO) | 1,2-ETHANEDIOL | ||
| 11 | k | K 1 (A) | non-polymer(EDO) | 1,2-ETHANEDIOL | ||
| 12 | l | L 1 (B) | non-polymer(ALD) | N-[(benzyloxy)carbonyl]-L-leucyl-N-[(2S)-1-hydroxy-4-methylpentan-2-yl]-L-leucinamide | 41H 49M 142N 143G 144S 145C 163H 164H 165M 166E 168P 189Q 190T 191A 192Q (identity: 100.0 %/100.0 %) | |
| 13 | m | M 1 (B) | non-polymer(EDO) | 1,2-ETHANEDIOL | 118Y (identity: 100.0 %/100.0 %) | |
| 14 | n | N 1 (B) | non-polymer(EDO) | 1,2-ETHANEDIOL | 301S 302G 303V (identity: 100.0 %/100.0 %) | |
| 15 | o | O 1 (B) | non-polymer(NA) | SODIUM ION | 221N 222R 223F 263D 266A (identity: 100.0 %/100.0 %) | |
| 16 | p | P 1 (B) | non-polymer(EDO) | 1,2-ETHANEDIOL | 6M 7A 8F 127Q 298R (identity: 100.0 %/100.0 %) | |
| ALIGNMENTS |
| MODEL[2] Protein A "queryA" TEMPLATE:7bgp_B_1 identity=100.0% |
queryA 1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100
:****************************************************************************************************:
7bgp_B_1 1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100
SecStr : HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG BTTB SS HHHHHHH GGGEEEEETTEEE EEEEEEETTEEEEEESS TT S:
ExpBur :eebeeeebebeebeebbbbbbbeeeebbbbbbeeebbbbebbbbeeeeeeebebeebbeeeeeeebebebeeeebebebeeeeebbbebebeeebeeebe:
Contact :aa aaaaaaaa a l l
Contact : ppp
queryA 101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI: 200
:****************************************************************************************************:
7bgp_B_1 101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI: 200
SecStr :EEE TT EEEEEEEETTEEEEEEEEE TTS B TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BSSS SSSS B :
ExpBur :eeeeebeebebbbbbbbbebeeeeeebbbbbbbebbeeebeeebbbbbbbbbeeebbbbbbbbbbebeeebbbbbbbebebbeebebeeeebebeebeeb:
Contact : a i aaaaaaa aaaaallll llla l a a llll
Contact : m i p l
queryA 201:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC: 300
:****************************************************************************************************:
7bgp_B_1 201:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC: 300
SecStr :HHHHHHHHHHHHHTT TT S HHHHHHHHHHTTB HHHHHHHHHHHHHHT HHHHHHHHHHHHHH TT BTTBSS HHHHHHHH:
ExpBur :bbbbbbbbbbbbeeeeeebeeeeebeeeebeebbeeeebeebeeebbeebeebbeebebebebbbbbbbebbeeebeeeebeebeebebbbbbebbeebe:
Contact : ooo o o a aa a paa
queryA 301:SGVTF: 305
:*****:
7bgp_B_1 301:SGVTF: 305
SecStr :HT :
ExpBur :eeeee:
Contact :aaaaa
Contact :nnn
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