Protein Model on 5kod_D_1_M_1 (TEMPLATE: 5kod )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:4]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query F)
1 a FD 1 (D) polymer(polypeptide(L)) [566 aa] Indole-3-acetic acid-amido synthetase GH3.5 :GH35_ARATH
2 b M 1 (D) non-polymer(AMP) ADENOSINE MONOPHOSPHATE 109S 110S 312I 314T 315G 337M 338Y 339A 340S 341S 360Y 425V 427D 443F 446R
FOCUSED TEMPLATE
MODEL[1] TEMPLATE:5kod_D_1
5kod_D_1       1:XXXXXXXXXXXXXXXTLDQKNKQKLQLIEELTSNADQVQRQVLEEILTRNADVEYLRRHDLNGRTDRETFKNIMPVITYEDIEPEINRIANGDKSPILSS: 100
SecStr          :--------------- HHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSHHHHHTT TT   HHHHHHHS  B HHHHHHHHHHHHTT  SSSS S:    
ExpBur          :---------------eeeeebeeeeeebeebbeebeebbeebbeebbeebbebebbeeeebeeeeebebbbeebebbebeebeebbeebbeeeeeebbbe:    

5kod_D_1     101:KPISEFLTSSGTSGGERKLMPTIEEELDRRSLLYSLLMPVMSQFVPGLENGKGMYFLFIKSESKTPGGLPARPVLTSYYKSSHFKERPYDPYTNYTSPNE: 200
SecStr          :S   EEEEEEEEETTEEEEEEE TTHHHHHHHHHHHHHHHHTTTS  GGGSEEEEE      EE TTS EEE HHHHHHTSHHHHT    GGG BSS HH:    
ExpBur          :eebebbbbbbbebeeebbbbbbbeebbebbeebeebbbbbbeeebeebeebbbbbbbebeeeeebeeeeebbbbebbbbebeebeeeeeebbeebbbebe:    
Contact         :        bb                                                                                          

5kod_D_1     201:TILCSDSYQSMYSQMLCGLCQHQEVLRVGAVFASGFIRAIKFLEKHWIELVRDIRTGTLSSLITDPSVREAVAKILKPSPKLADFVEFECKKSSWQGIIT: 300
SecStr          :HHS S HHHHHHHHHHHHHHTGGGEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHT   TT   HHHHHHHHTT    HHHHHHHHHHHHSS  TTHHH:    
ExpBur          :bbbbeeeebbbbbbbbbbbebbeebbbbbbeebbbbbbbbebbeebbeebbebbeeeebbeebeeeebeebbeeebeeeeebbeebeebbeeeebebbbe:    

5kod_D_1     301:RLWPNTKYVDVIVTGTMSQYIPTLDYYSNGLPLVCTMYASSECYFGVNLRPLCKPSEVSYTLIPSMAYFEFLPVHXXXXXXXXXXXXXXXXXXXXQELVD: 400
SecStr          :HHSTT   EEEE SGGGGGGHHHHHHHHTS  EE  EEE SS EEEE S TTS GGG  EEE TTSSEEEEEEE --------------------   EE:    
ExpBur          :ebbeebebbbbebbeebebbeebbeebbeebebbbbbbebbbbbbbbbbebebeeeebbbbbbbebbbbbbeeee--------------------eebeb:    
Contact         :           b bb                     bbbbb                  b                                        

5kod_D_1     401:LVDVKLGQEYELVVTTYAGLCRYRVGDLLRVTGFKNKAPQFSFICRKNVVLSIDSDKTDEVELQNAVKNAVTHLVPFDASLSEYTSYADTSSIPGHYVLF: 500
SecStr          :GGG  TT EEEEEEE TTS  SEEEEEEEEEEEEETTEEEEEEEEETT  B SSS  B HHHHHHHHHHHHGGGGGGT  EEEEEEEEE SSSS EEEEE:    
ExpBur          :beebeeeeebbbbbbbbbbbbbbebbbbbebebeeeebbebbeeebeeeebbbbbbebeeebbeebbeebbeebeeeebebeebbbbbbeeebebbbbbb:    
Contact         :                        b b               b  b                                                      

5kod_D_1     501:WELCXXXXXPIPPSVFEDCCLAVEESFNTVYRQGRVSDKSIGPLEIKIVEPGTFDKLMDYAISLGASINQYKTPRCVKFAPIIELLNSRVVDSYFSPKCP: 600
SecStr          :EEE -----   HHHHHHHHHHHHHTS HHHHHHHHTT  S   EEEEE TTHHHHHHHHHHHTT  STT    SS   HHHHHHHHTTEEEEEE SS  :    
ExpBur          :bbee-----ebeeebbeebbebbbeebbbbbbbbbeebebbbebbbbbbeeebbeebeeebeeeeeeeeebebeeebeeeebbebbeeeeeeebebeeeb:    

5kod_D_1     601:KWVPGH----------------------------------------------------------------------------------------------: 606
SecStr          :   TT-:    
ExpBur          :ebeee-:    


Input Residue Numbers for Focused Sites

ex) 2,15,123