Protein Model on 3ra8_A_19_B_19 (TEMPLATE: 3ra8 )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[3D template]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query F)
1 a FA 19 (A) polymer(polypeptide(L)) [519 aa] Capsid protein :Q8JQF8_9VIRU
2 b B 19 (A) non-polymer(A) ADENOSINE-5'-MONOPHOSPHATE 202V 413H 414P 415S 420G 421F 422G
FOCUSED TEMPLATE
MODEL[1] TEMPLATE:3ra8_A_19
3ra8_A_19      1:DGVGSSSGNWHCDSTWLGDRVITTSTRTWALPTYNNHLYKQISNGTSGGATNDNTYFGYSTPWGYFDFNRFHCHFSPRDWQRLINNNWGFRPKRLSFKLF: 100
SecStr          :  TTS       EEEE SSEEEEEEEEEEEE   GGG  EEEEE SSTT  GGG EEEEEEEEEEE   BGGGT  HHHHHHHHHHEEEEEEEEEEEEEE:    
ExpBur          :eeeeeebbeeeeebeeeeebbbbbbbbebebeebbeeeeeeeeebeeeeeeeeebebbbbbbbbbbbbbebbbbbeeebbbebbbebbbbbbbebebebb:    

3ra8_A_19    101:NIQVKEVTQNEGTKTIANNLTSTIQVFTDSEYQLPYVLGSAHQGCLPPFPADVFMIPQYGYLTLNNGSQAVGRSSFYCLEYFPSQMLRTGNNFQFTYTFE: 200
SecStr          :EEEEEEEEEETTEEEEEE TT  EEEEE TT  S   TTS  S S  SSTT EEE  EEEEEE  BTTB  TT     GGGS  EEE TT  EEEEEE  :    
ExpBur          :ebebbebeeeeeeeeeeebeebbbbbbebeeeebebbbeeeeeebbbeeeeeebebbebebeeebeeeeeeeeeeeeebeebeeeebeebeebebebebe:    

3ra8_A_19    201:DVPFHSSYAHSQSLDRLMNPLIDQYLYYLSRTQTTGGTANTQTLGFSQGGPNTMANQAKNWLPGPCYRQQRVSTTTGQNNNSNFAWTAGTKYHLNGRNSL: 300
SecStr          :    EE EEESS GGG S TT   S EEEEEEE  SSS   EEEEEEE  GGGGGGS  S B   EE   EEESSGGGS SS  TTTT  EEEETTEEEE:    
ExpBur          :ebeebbbbbbeeebeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeebbeeebeebeeeeeebebeebeebbeeeeeeeeeebeeeebbeeeeeeeeee:    
Contact         : b                                                                                                  

3ra8_A_19    301:ANPGIAMATHKDDEERFFPSNGILIFGKQNAARDNADYSDVMLTSEEEIKTTNPVATEEYGIVADNLQQQNTAPQIGTVNSQGALPGMVWQNRDVYLQGP: 400
SecStr          :  S S  BS  TT TTEEETTSS EEE TT  SSS  GGGEEE   GGGTTTS BTTS  EEEE S   SSS   EEEE EE   TTB        TTSB:    
ExpBur          :bebbebbbbbeeebeebbbebbbbebeeeeeeeeeeeeeeebebebeebebbbbbbbeeeeeeeeeeeeeeeeeeebebeeeeeeeebeebebbbbbbbe:    

3ra8_A_19    401:IWAKIPHTDGNFHPSPLMGGFGLKHPPPQILIKNTPVPADPPTTFNQSKLNSFITQYSTGQVSVEIEWELQKENSKRWNPEIQYTSNYYKSTSVDFAVNT: 500
SecStr          : EEE    S  SS   TTSSEEESS    EEEEE   B    SS   S    B  EEEEEEEEEEEEEEEEE      S         S  SS SSS  S:    
ExpBur          :bbbebeeeeeeeeeeeeebbbbbeebbbbbbbbbbeeeeeeeeeeeeeeeeeeeebebbbbbbbebbbbbeeeeeeeeeebeebeeeeeeeeeeebeeee:    
Contact         :            bbb    bbb                                                                              

3ra8_A_19    501:EGVYSEPRPIGTRYLTRNL---------------------------------------------------------------------------------: 519
SecStr          :SS     S   S  EEE -:    
ExpBur          :eeebebeeebbbbebbee-:    


Input Residue Numbers for Focused Sites

ex) 2,15,123