Protein Model on 5i85 assembly_id=2 (TEMPLATE: 5i85 assembly_id:2 )

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(ASM_HUMAN) A 1 (A) polymer(polypeptide(L)) [528 aa] Sphingomyelin phosphodiesterase :ASM_HUMAN
2 b A 2 (A) polymer(polypeptide(L)) [528 aa] Sphingomyelin phosphodiesterase :ASM_HUMAN
3 c A 3 (A) polymer(polypeptide(L)) [528 aa] Sphingomyelin phosphodiesterase :ASM_HUMAN 264S 267G 268P 270G 271P 307K 308F 311P 312V (identity: 100.0 %/100.0 %)
4 d A 4 (A) polymer(polypeptide(L)) [528 aa] Sphingomyelin phosphodiesterase :ASM_HUMAN 236P 237P 238A 239S 249Y 528I 529P 580H 581P 582P 583S (identity: 100.0 %/100.0 %)
5 e B 1 (B) branched(oligosaccharide) beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 290T 291R 337N (identity: 100.0 %/100.0 %)
6 f B 2 (B) branched(oligosaccharide) beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
7 g B 3 (B) branched(oligosaccharide) beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
8 h B 4 (B) branched(oligosaccharide) beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
9 i C 1 (C) branched(oligosaccharide) alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 171D 177N 178I 179S 397N 399T 406Q (identity: 100.0 %/100.0 %)
10 j C 2 (C) branched(oligosaccharide) alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
11 k C 3 (C) branched(oligosaccharide) alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
12 l C 4 (C) branched(oligosaccharide) alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
13 m D 1 (D) branched(oligosaccharide) 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 520I 522N 524T 525Q 536Q 574F 579G (identity: 100.0 %/100.0 %)
14 n D 2 (D) branched(oligosaccharide) 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
15 o D 3 (D) branched(oligosaccharide) 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
16 p D 4 (D) branched(oligosaccharide) 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
17 q E 1 (A) non-polymer(NAG) 2-acetamido-2-deoxy-beta-D-glucopyranose 88N (identity: 100.0 %/100.0 %)
18 r E 2 (A) non-polymer(NAG) 2-acetamido-2-deoxy-beta-D-glucopyranose
19 s E 3 (A) non-polymer(NAG) 2-acetamido-2-deoxy-beta-D-glucopyranose
20 t E 4 (A) non-polymer(NAG) 2-acetamido-2-deoxy-beta-D-glucopyranose
21 u F 1 (A) non-polymer(NAG) 2-acetamido-2-deoxy-beta-D-glucopyranose 175S 177N (identity: 100.0 %/100.0 %)
22 v F 2 (A) non-polymer(NAG) 2-acetamido-2-deoxy-beta-D-glucopyranose
23 w F 3 (A) non-polymer(NAG) 2-acetamido-2-deoxy-beta-D-glucopyranose
24 x F 4 (A) non-polymer(NAG) 2-acetamido-2-deoxy-beta-D-glucopyranose
25 y G 1 (A) non-polymer(NAG) 2-acetamido-2-deoxy-beta-D-glucopyranose 373P 374Y 375P 505N (identity: 100.0 %/100.0 %)
26 z G 2 (A) non-polymer(NAG) 2-acetamido-2-deoxy-beta-D-glucopyranose
27 1 G 3 (A) non-polymer(NAG) 2-acetamido-2-deoxy-beta-D-glucopyranose
28 2 G 4 (A) non-polymer(NAG) 2-acetamido-2-deoxy-beta-D-glucopyranose
29 3 H 1 (A) non-polymer(ZN) ZINC ION 208D 280D 320N 427H 459H (identity: 100.0 %/100.0 %)
30 4 H 2 (A) non-polymer(ZN) ZINC ION
31 5 H 3 (A) non-polymer(ZN) ZINC ION
32 6 H 4 (A) non-polymer(ZN) ZINC ION
33 7 I 1 (A) non-polymer(ZN) ZINC ION 208D 210H 280D 461H (identity: 100.0 %/100.0 %)
34 8 I 2 (A) non-polymer(ZN) ZINC ION
35 9 I 3 (A) non-polymer(ZN) ZINC ION
36 A I 4 (A) non-polymer(ZN) ZINC ION
37 B J 1 (A) non-polymer(SO4) SULFATE ION 432H 459H (identity: 100.0 %/100.0 %)
38 C J 2 (A) non-polymer(SO4) SULFATE ION
39 D J 3 (A) non-polymer(SO4) SULFATE ION
40 E J 4 (A) non-polymer(SO4) SULFATE ION
41 F K 1 (A) non-polymer(SO4) SULFATE ION 107K 110N (identity: 100.0 %/100.0 %)
42 G K 2 (A) non-polymer(SO4) SULFATE ION
43 H K 3 (A) non-polymer(SO4) SULFATE ION
44 I K 4 (A) non-polymer(SO4) SULFATE ION
45 J L 1 (A) non-polymer(SO4) SULFATE ION 134Q 135S 138H (identity: 100.0 %/100.0 %)
46 K L 2 (A) non-polymer(SO4) SULFATE ION
47 L L 3 (A) non-polymer(SO4) SULFATE ION
48 M L 4 (A) non-polymer(SO4) SULFATE ION
49 N M 1 (A) non-polymer(SO4) SULFATE ION 189K 192S (identity: 100.0 %/100.0 %)
50 O M 2 (A) non-polymer(SO4) SULFATE ION
51 P M 3 (A) non-polymer(SO4) SULFATE ION
52 Q M 4 (A) non-polymer(SO4) SULFATE ION
53 R N 1 (A) non-polymer(SO4) SULFATE ION 150R 334I 335E 338H (identity: 100.0 %/100.0 %)
54 S N 2 (A) non-polymer(SO4) SULFATE ION
55 T N 3 (A) non-polymer(SO4) SULFATE ION
56 U N 4 (A) non-polymer(SO4) SULFATE ION
57 V O 1 (A) non-polymer(SO4) SULFATE ION 585P 586C 587G 588T 589P 590C (identity: 100.0 %/100.0 %)
58 W O 2 (A) non-polymer(SO4) SULFATE ION
59 X O 3 (A) non-polymer(SO4) SULFATE ION
60 Y O 4 (A) non-polymer(SO4) SULFATE ION
61 Z P 1 (A) non-polymer(SO4) SULFATE ION 582P 583S 584E (identity: 100.0 %/100.0 %)
62 a P 2 (A) non-polymer(SO4) SULFATE ION
63 b P 3 (A) non-polymer(SO4) SULFATE ION
64 c P 4 (A) non-polymer(SO4) SULFATE ION 237P 238A (identity: 100.0 %/100.0 %)
65 d Q 1 (A) non-polymer(SO4) SULFATE ION 564G 565D 566M 567Q (identity: 100.0 %/100.0 %)
66 e Q 2 (A) non-polymer(SO4) SULFATE ION
67 f Q 3 (A) non-polymer(SO4) SULFATE ION
68 g Q 4 (A) non-polymer(SO4) SULFATE ION
69 h R 1 (A) non-polymer(SO4) SULFATE ION 563R 564G (identity: 100.0 %/100.0 %)
70 i R 2 (A) non-polymer(SO4) SULFATE ION
71 j R 3 (A) non-polymer(SO4) SULFATE ION
72 k R 4 (A) non-polymer(SO4) SULFATE ION
73 l S 1 (A) non-polymer(SO4) SULFATE ION 142D (identity: 100.0 %/100.0 %)
74 m S 2 (A) non-polymer(SO4) SULFATE ION
75 n S 3 (A) non-polymer(SO4) SULFATE ION
76 o S 4 (A) non-polymer(SO4) SULFATE ION
77 p T 1 (A) non-polymer(SO4) SULFATE ION 273D 374Y 505N (identity: 100.0 %/100.0 %)
78 q T 2 (A) non-polymer(SO4) SULFATE ION
79 r T 3 (A) non-polymer(SO4) SULFATE ION
80 s T 4 (A) non-polymer(SO4) SULFATE ION
81 t U 1 (A) non-polymer(PC) PHOSPHOCHOLINE 208D 210H 280D 284H 320N 321H 427H 459H 461H (identity: 100.0 %/100.0 %)
82 u U 2 (A) non-polymer(PC) PHOSPHOCHOLINE
83 v U 3 (A) non-polymer(PC) PHOSPHOCHOLINE
84 w U 4 (A) non-polymer(PC) PHOSPHOCHOLINE
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:5i85_A_1 identity=100.0%
queryA        86:WGNLTCPICKGLFTAINLGLKKEPNVARVGSVAIKLCNLLKIAPPAVCQSIVHLFEDDMVEVWRRSVLSPSEACGLLLGSTCGHWDIFSSWNISLPTVPK: 185
                :****************************************************************************************************:
5i85_A_1      38:WGNLTCPICKGLFTAINLGLKKEPNVARVGSVAIKLCNLLKIAPPAVCQSIVHLFEDDMVEVWRRSVLSPSEACGLLLGSTCGHWDIFSSWNISLPTVPK: 137
SecStr          : GGGHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHTT S HHHHHHHHHHHHHHHHHHHHHTTTSHHHHHHHHH TTT    TT        SS  :    
ExpBur          :eeeeebeebeeebeeebeebeeeeebeeebeeebeebeeeeeeeeebbeeebeebbebebbbebebeebeebbbbeeeeeebbeeebeeebebeeeeeee:    
Contact         :  q                  F  F                       JJ  J   l       R                    i   u iii      
Contact         :                                                                                           u        

queryA       186:PPPKPPSPPAPGAPVSRILFLTDLHWDHDYLEGTDPDCADPLCCRRGSGLPPASRPGAGYWGEYSKCDLPLRTLESLLSGLGPAGPFDMVYWTGDIPAHD: 285
                :****************************************************************************************************:
5i85_A_1     138:PPPKPPSPPAPGAPVSRILFLTDLHWDHDYLEGTDPDCADPLCCRRGSGLPPASRPGAGYWGEYSKCDLPLRTLESLLSGLGPAGPFDMVYWTGDIPAHD: 237
SecStr          :          TT  EEEEEEE    B TTB TTS TT SSSS SBTTS    TTS    SS  SSS  B HHHHHHHHHT GGG   SEEEE S  S S :    
ExpBur          :eeeeeeeeeeeebeebebbbbbbbbbbeebeeebbbebebebbbbeebeeeeeeeeebbebbbebebbbbeebbebbbeebeebeebebbbbbbbbbbbb:    
Contact         :   N  N               3 7                         dddd         d              c  cc cc p      3   t 
Contact         :                      7 t                          cc                                         7     
Contact         :                      t                                                                       t     

queryA       286:VWHQTRQDQLRALTTVTALVRKFLGPVPVYPAVGNHESTPVNSFPPPFIEGNHSSRWLYEAMAKAWEPWLPAEALRTLRIGGFYALSPYPGLRLISLNMN: 385
                :****************************************************************************************************:
5i85_A_1     238:VWHQTRQDQLRALTTVTALVRKFLGPVPVYPAVGNHESTPVNSFPPPFIEGNHSSRWLYEAMAKAWEPWLPAEALRTLRIGGFYALSPYPGLRLISLNMN: 337
SecStr          :TTS  HHHHHHHHHHHHHHHHHHHTTS EEE   TTSSSSTT    TT  STTSSHHHHHHHHHHSTTTS HHHHHHHHHHS EEEEEETTEEEEE  GG:    
ExpBur          :bbebeeeebeebbeebbebbeeebeebebbbbbbbbbbbbbbbbbbeebeeeebbebbbebbbebbeebbeeebbebbeebbbbbbebbeebbbbbbbbb:    
Contact         :    ee               cc  cc       3t            RR eR                                  yyy          
Contact         :                                  t                                                     p           

queryA       386:FCSRENFWLLINSTDPAGQLQWLVGELQAAEDRGDKVHIIGHIPPGHCLKSWSWNYYRIVARYENTLAAQFFGHTHVDEFEVFYDEETLSRPLAVAFLAP: 485
                :****************************************************************************************************:
5i85_A_1     338:FCSRENFWLLINSTDPAGQLQWLVGELQAAEDRGDKVHIIGHIPPGHCLKSWSWNYYRIVARYENTLAAQFFGHTHVDEFEVFYDEETLSRPLAVAFLAP: 437
SecStr          :GT TT GGGGT  SSGGGHHHHHHHHHHHHHHHT EEEEE SS GGGS HHHHHHHHHHHHHTTTTEEEEEE SS S EEEEEE TTTS SEEEEEEE  :    
ExpBur          :bbbeebbbbbbebebbeebbeebbebbbebbeeebebbbbbbbbbbebbebbbebbbebbbbbbebbbbbbbbebbbbbbbbbbbeeebeebbbbbbbbb:    
Contact         :           i i      i                    3    B                          3 7                        
Contact         :                                         t                               B t                        
Contact         :                                                                         t                          

queryA       486:SATTYIGLNPGYRVYQIDGNYSGSSHVVLDHETYILNLTQANIPGAIPHWQLLYRARETYGLPNTLPTAWHNLVYRMRGDMQLFQTFWFLYHKGHPPSEP: 585
                :****************************************************************************************************:
5i85_A_1     438:SATTYIGLNPGYRVYQIDGNYSGSSHVVLDHETYILNLTQANIPGAIPHWQLLYRARETYGLPNTLPTAWHNLVYRMRGDMQLFQTFWFLYHKGHPPSEP: 537
SecStr          : SS TTT   EEEEEEEE SSTT    EEEEEEEE  HHHHTSTT     EEEEEHHHHHT S  SHHHHHHHHHHHHH HHHHHHHHHHHTTT   SS :    
ExpBur          :bbbbeebbbbbbbbbbbbbeeeebbbbbebbbbbbbebeebeeeeeebebeebbebeeebebeebbbebbeebbeebeeeeebbeebbebbbbeeeeeee:    
Contact         :                   y              m m mm  dd      m                          hdddd      m    mddddZV
Contact         :                   p                                                          h                 ZZ  

queryA       586:CGTPCRLATLCAQLSARADSPALCRHLM: 613
                :****************************:
5i85_A_1     538:CGTPCRLATLCAQLSARADSPALCRHLM: 565
SecStr          :  HHHHHHHHHHHT  STT GGGGTTT :    
ExpBur          :beeeebbebbbebbebbbebeebbeebe:    
Contact         :VVVVV

Input Residue Numbers for Focused Sites

ex) 2,15,123