Protein Model on 5i85 assembly_id=1
(TEMPLATE: 
5i85
assembly_id:1
)Protein Model on 5i85 assembly_id=1
(TEMPLATE: 5i85
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(ASM_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [528 aa] | Sphingomyelin phosphodiesterase :ASM_HUMAN | |
| 2 | b | B 1 (B) | branched(oligosaccharide) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 290T 291R 337N (identity: 100.0 %/100.0 %) | |
| 3 | c | C 1 (C) | branched(oligosaccharide) | alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 171D 177N 178I 179S 397N 399T 406Q (identity: 100.0 %/100.0 %) | |
| 4 | d | D 1 (D) | branched(oligosaccharide) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 520I 522N 524T 525Q 536Q 574F 579G (identity: 100.0 %/100.0 %) | |
| 5 | e | E 1 (A) | non-polymer(NAG) | 2-acetamido-2-deoxy-beta-D-glucopyranose | 88N (identity: 100.0 %/100.0 %) | |
| 6 | f | F 1 (A) | non-polymer(NAG) | 2-acetamido-2-deoxy-beta-D-glucopyranose | 175S 177N (identity: 100.0 %/100.0 %) | |
| 7 | g | G 1 (A) | non-polymer(NAG) | 2-acetamido-2-deoxy-beta-D-glucopyranose | 373P 374Y 375P 505N (identity: 100.0 %/100.0 %) | |
| 8 | h | H 1 (A) | non-polymer(ZN) | ZINC ION | 208D 280D 320N 427H 459H (identity: 100.0 %/100.0 %) | |
| 9 | i | I 1 (A) | non-polymer(ZN) | ZINC ION | 208D 210H 280D 461H (identity: 100.0 %/100.0 %) | |
| 10 | j | J 1 (A) | non-polymer(SO4) | SULFATE ION | 432H 459H (identity: 100.0 %/100.0 %) | |
| 11 | k | K 1 (A) | non-polymer(SO4) | SULFATE ION | 107K 110N (identity: 100.0 %/100.0 %) | |
| 12 | l | L 1 (A) | non-polymer(SO4) | SULFATE ION | 134Q 135S 138H (identity: 100.0 %/100.0 %) | |
| 13 | m | M 1 (A) | non-polymer(SO4) | SULFATE ION | 189K 192S (identity: 100.0 %/100.0 %) | |
| 14 | n | N 1 (A) | non-polymer(SO4) | SULFATE ION | 150R 334I 335E 338H (identity: 100.0 %/100.0 %) | |
| 15 | o | O 1 (A) | non-polymer(SO4) | SULFATE ION | 585P 586C 587G 588T 589P 590C (identity: 100.0 %/100.0 %) | |
| 16 | p | P 1 (A) | non-polymer(SO4) | SULFATE ION | 582P 583S 584E (identity: 100.0 %/100.0 %) | |
| 17 | q | Q 1 (A) | non-polymer(SO4) | SULFATE ION | 564G 565D 566M 567Q (identity: 100.0 %/100.0 %) | |
| 18 | r | R 1 (A) | non-polymer(SO4) | SULFATE ION | 563R 564G (identity: 100.0 %/100.0 %) | |
| 19 | s | S 1 (A) | non-polymer(SO4) | SULFATE ION | 142D (identity: 100.0 %/100.0 %) | |
| 20 | t | T 1 (A) | non-polymer(SO4) | SULFATE ION | 273D 374Y 505N (identity: 100.0 %/100.0 %) | |
| 21 | u | U 1 (A) | non-polymer(PC) | PHOSPHOCHOLINE | 208D 210H 280D 284H 320N 321H 427H 459H 461H (identity: 100.0 %/100.0 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5i85_A_1 identity=100.0% |
queryA 86:WGNLTCPICKGLFTAINLGLKKEPNVARVGSVAIKLCNLLKIAPPAVCQSIVHLFEDDMVEVWRRSVLSPSEACGLLLGSTCGHWDIFSSWNISLPTVPK: 185
:****************************************************************************************************:
5i85_A_1 38:WGNLTCPICKGLFTAINLGLKKEPNVARVGSVAIKLCNLLKIAPPAVCQSIVHLFEDDMVEVWRRSVLSPSEACGLLLGSTCGHWDIFSSWNISLPTVPK: 137
SecStr : GGGHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHTT S HHHHHHHHHHHHHHHHHHHHHTTTSHHHHHHHHH TTT TT SS :
ExpBur :eeeeebeebeeebeeebeebeeeeebeeebeeebeebeeeeeeeeebbeeebeebbebebbbebebeebeebbbbeeeeeebbeeebeeebebeeeeeee:
Contact : e k k ll l s n c f ccc
Contact : f
queryA 186:PPPKPPSPPAPGAPVSRILFLTDLHWDHDYLEGTDPDCADPLCCRRGSGLPPASRPGAGYWGEYSKCDLPLRTLESLLSGLGPAGPFDMVYWTGDIPAHD: 285
:****************************************************************************************************:
5i85_A_1 138:PPPKPPSPPAPGAPVSRILFLTDLHWDHDYLEGTDPDCADPLCCRRGSGLPPASRPGAGYWGEYSKCDLPLRTLESLLSGLGPAGPFDMVYWTGDIPAHD: 237
SecStr : TT EEEEEEE B TTB TTS TT SSSS SBTTS TTS SS SSS B HHHHHHHHHT GGG SEEEE S S S :
ExpBur :eeeeeeeeeeeebeebebbbbbbbbbbeebeeebbbebebebbbbeebeeeeeeeeebbebbbebebbbbeebbebbbeebeebeebebbbbbbbbbbbb:
Contact : m m h i t h u
Contact : i u i
Contact : u u
queryA 286:VWHQTRQDQLRALTTVTALVRKFLGPVPVYPAVGNHESTPVNSFPPPFIEGNHSSRWLYEAMAKAWEPWLPAEALRTLRIGGFYALSPYPGLRLISLNMN: 385
:****************************************************************************************************:
5i85_A_1 238:VWHQTRQDQLRALTTVTALVRKFLGPVPVYPAVGNHESTPVNSFPPPFIEGNHSSRWLYEAMAKAWEPWLPAEALRTLRIGGFYALSPYPGLRLISLNMN: 337
SecStr :TTS HHHHHHHHHHHHHHHHHHHTTS EEE TTSSSSTT TT STTSSHHHHHHHHHHSTTTS HHHHHHHHHHS EEEEEETTEEEEE GG:
ExpBur :bbebeeeebeebbeebbebbeeebeebebbbbbbbbbbbbbbbbbbeebeeeebbebbbebbbebbeebbeeebbebbeebbbbbbebbeebbbbbbbbb:
Contact : bb hu nn bn ggg
Contact : u t
queryA 386:FCSRENFWLLINSTDPAGQLQWLVGELQAAEDRGDKVHIIGHIPPGHCLKSWSWNYYRIVARYENTLAAQFFGHTHVDEFEVFYDEETLSRPLAVAFLAP: 485
:****************************************************************************************************:
5i85_A_1 338:FCSRENFWLLINSTDPAGQLQWLVGELQAAEDRGDKVHIIGHIPPGHCLKSWSWNYYRIVARYENTLAAQFFGHTHVDEFEVFYDEETLSRPLAVAFLAP: 437
SecStr :GT TT GGGGT SSGGGHHHHHHHHHHHHHHHT EEEEE SS GGGS HHHHHHHHHHHHHTTTTEEEEEE SS S EEEEEE TTTS SEEEEEEE :
ExpBur :bbbeebbbbbbebebbeebbeebbebbbebbeeebebbbbbbbbbbebbebbbebbbebbbbbbebbbbbbbbebbbbbbbbbbbeeebeebbbbbbbbb:
Contact : c c c h j h i
Contact : u j u
Contact : u
queryA 486:SATTYIGLNPGYRVYQIDGNYSGSSHVVLDHETYILNLTQANIPGAIPHWQLLYRARETYGLPNTLPTAWHNLVYRMRGDMQLFQTFWFLYHKGHPPSEP: 585
:****************************************************************************************************:
5i85_A_1 438:SATTYIGLNPGYRVYQIDGNYSGSSHVVLDHETYILNLTQANIPGAIPHWQLLYRARETYGLPNTLPTAWHNLVYRMRGDMQLFQTFWFLYHKGHPPSEP: 537
SecStr : SS TTT EEEEEEEE SSTT EEEEEEEE HHHHTSTT EEEEEHHHHHT S SHHHHHHHHHHHHH HHHHHHHHHHHTTT SS :
ExpBur :bbbbeebbbbbbbbbbbbbeeeebbbbbebbbbbbbebeebeeeeeebebeebbebeeebebeebbbebbeebbeebeeeeebbeebbebbbbeeeeeee:
Contact : g d d dd d rqqqq d d pppo
Contact : t r
queryA 586:CGTPCRLATLCAQLSARADSPALCRHLM: 613
:****************************:
5i85_A_1 538:CGTPCRLATLCAQLSARADSPALCRHLM: 565
SecStr : HHHHHHHHHHHT STT GGGGTTT :
ExpBur :beeeebbebbbebbebbbebeebbeebe:
Contact :ooooo
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