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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | |
1 | a | A(NCAP_SARS) | A 1 (A) | polymer(polypeptide(L)) [419 aa] | Nucleoprotein :NCAP_SARS2 |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:8fg2_A_1 identity=91.2% |
queryA 1:MSDNGPQSNQRSAPRITFGGPTDSTDNNQNGGRNGARPKQRRPQGLPNNTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDG: 100 :******* *** ********* *** **** * *** ************************* * ************* ************** *****: 8fg2_A_1 1:MSDNGPQ-NQRNAPRITFGGPSDSTGSNQNGERSGARSKQRRPQGLPNNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDG: 99 SecStr :- S TT- TTTS TTSSS SSS S TTTT SS TT EE SS SSS S TTT SS EEEEE S S S: ExpBur :-eeebee-bebbeeebeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeebeebebbbbbbbeeeebebeeeebbbebebbbeebbbbbbbebeeeeeeeee: queryA 101:KMKELSPRWYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTLPKGFYAEGSRGGSQASSRSSSRSRGNSRNSTP: 200 :*** **************** ******* ** ******************** **** ********************************** ******: 8fg2_A_1 100:KMKDLSPRWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLPKGFYAEGSRGGSQASSRSSSRSRNSSRNSTP: 199 SecStr :SGGGS EEEEEETT SSTT SSS SSSEE TT STTTS TTS S SSS TT B TTT SS TTS S SS : ExpBur :eeeebbeebebbbbbbbeeebeeebeeeeebeeebeeebebeeeeebbbeeeeeeebbbbbbbbbeebeeebbbbbbeeeebeebeebbeeeeeeebbbb: queryA 201:GSSRGNSPARMASGGGETALALLLLDRLNQLESKVSGKGQQQQGQTVTKKSAAEASKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYK: 300 :***** ****** ** **************** ******************************** ********************** *********: 8fg2_A_1 200:GSSRGTSPARMAGNGGDAALALLLLDRLNQLESKMSGKGQQQQGQTVTKKSAAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYK: 299 SecStr : SS S SSSSSSTTTTTHHHHHHHHHHHHHH TT S S SSGGGGS GGG BTTB HHHHS S SS SSS SB HHHHHH TT T: ExpBur :bbeebebeeeebbebeebbbbbbbbbbbbebbbebbbeebeebbbebeeeeeeebbeebbeebebeeebebbbbbbbbeeeebbbebbbbbbbbeebebe: queryA 301:HWPQIAQFAPSASAFFGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFPPTEPKKDKKKKTDEAQPLPQRQKKQPTVTLLPAAD: 400 :********************************** ********** *** ************************** ** * ******** *********: 8fg2_A_1 300:HWPQIAQFAPSASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFPPTEPKKDKKKKADETQALPQRQKKQQTVTLLPAAD: 399 SecStr :THHHHTTSS HHHHTTTS EEE TTSSEEE TTSTTHHHHHHHHHHHBTGGGGSTTTSS TT SS S S STT TTH: ExpBur :bbeebeebeeeeeebeeebeeeeeeeebeebbbbeeeeeeeeeeeebeebbbbbeebeebbebbeeeeeeeeebeeeeeeeeeeeeeeeebeeeebebbb: queryA 401:MDDFSRQLQNSMSGASADSTQA: 422 : **** *** *** *******: 8fg2_A_1 400:LDDFSKQLQQSMS--SADSTQA: 419 SecStr :HHHHHHHHHHHHH--HHHSS : ExpBur :bbbebbbeeeeeb--eeeeeeb: |