Protein Model on 1z08 assembly_id=5
(TEMPLATE: 
1z08
assembly_id:5
)Protein Model on 1z08 assembly_id=5
(TEMPLATE: 1z08
assembly_id:5
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
|
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | g(query A) |
| 1 | a | D 1 (D) | polymer(polypeptide(L)) [166 aa] | Ras-related protein Rab-21 :RAB21_HUMAN | 79R 80G(D) 112P(K) 113R(M) 114D(L) 115P(G) 116E(N) 117N(E) 173A(M) 174L(I) 175K(E) (identity: 9.1 %/36.4 %) | |
| 2 | b | L 1 (D) | non-polymer(MG) | MAGNESIUM ION | ||
| 3 | c | M 1 (D) | non-polymer(MG) | MAGNESIUM ION | ||
| 4 | d | N 1 (D) | non-polymer(MG) | MAGNESIUM ION | ||
| 5 | e | O 1 (D) | non-polymer(MG) | MAGNESIUM ION | ||
| 6 | f | P 1 (D) | non-polymer(GNP) | PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER | ||
| 7 | g | A(RAB7A_HUMAN) | C 2 (C) | polymer(polypeptide(L)) [167 aa] | Ras-related protein Rab-21 :RAB21_HUMAN | |
| 8 | h | I 2 (C) | non-polymer(MG) | MAGNESIUM ION | 22T (identity: 100.0 %/36.4 %) | |
| 9 | i | J 2 (C) | non-polymer(MG) | MAGNESIUM ION | 68E (identity: 100.0 %/36.4 %) | |
| 10 | j | K 2 (C) | non-polymer(GNP) | PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER | 16D(E) 17S(G) 18G(C) 19V 20G 21K 22T 23S 33F 34S(N) 35N(D) 37Y(H) 65A 66G 125N 126K 128D 129L 155S 156A 157K (identity: 71.4 %/36.4 %) | |
| ALIGNMENTS |
| MODEL[7] Protein A "queryA" TEMPLATE:1z08_C_2 identity=36.4% |
queryA 9:LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLI: 108
: ** ** ****** * ** * ** **** * ********** ** ** ** * * * * * :
1z08_C_2 7:FKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLGASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKEL--: 104
SecStr :EEEEEEE TTS HHHHHHHHHHS SS S EEEEEEEEETTEEEEEEEEE GGGGGGT GGGTTT SEEEEEEETT HHHHHHHHHHHHHH--:
ExpBur :bbbbbbbbeebbbeebbbbbeeeeeeeeeeeeeeeeeeeeebebeeeebebebebbbbeeebeeebeebbeebebbbbbbbbbeeebbeebeebbeeb--:
Contact : jjjjjjhj jjj j jj i aa
Contact : j
queryA 109:QASPRDPENFPFVVLGNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALK: 175
: ******* * * * * **** * * :
1z08_C_2 105:--RKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAESV-GAKHYHTSAKQNKGIEELFLDLCKRMIE: 169
SecStr :--HHHHGGGSEEEEEEE GGGGGG S HHHHHHHHHHT-T EEEE BTTTTBSHHHHHHHHHHHHH :
ExpBur :--beeeeeebbbbbbbbeeeeeeebebeeeebeebbeee-ebbbbebbbeeeeebeebbeebbeebbe:
Contact : aaaaaa jj jj jjj aaa
|
[help]