Protein Model on 2y8e assembly_id=3
(TEMPLATE: 
2y8e
assembly_id:3
)Protein Model on 2y8e assembly_id=3
(TEMPLATE: 2y8e
assembly_id:3
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | b(query A) |
| 1 | a | A 1 (A) | polymer(polypeptide(L)) [165 aa] | RAB-PROTEIN 6 :O18334_DROME | 30N(Y) 32K(S) 41I 43A(I) 44D 45F 46L 47T(S) 48K 58T(R) (identity: 50.0 %/40.8 %) | |
| 2 | b | A(RAB7A_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [167 aa] | RAB-PROTEIN 6 :O18334_DROME | |
| 3 | c | C 1 (A) | non-polymer(SO4) | SULFATE ION | ||
| 4 | d | D 1 (A) | non-polymer(GNP) | PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER | ||
| 5 | e | E 1 (A) | non-polymer(MG) | MAGNESIUM ION | ||
| 6 | f | F 1 (B) | non-polymer(SO4) | SULFATE ION | 132R (identity: 100.0 %/40.8 %) | |
| 7 | g | G 1 (B) | non-polymer(SO4) | SULFATE ION | 160I(Y) 161N 168T(R) (identity: 33.3 %/40.8 %) | |
| 8 | h | H 1 (B) | non-polymer(GNP) | PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER | 16D(E) 17S(Q) 18G(S) 19V 20G 21K 22T 23S 33F 34S(D) 35N 37Y 39A 40T 65A 66G 125N 126K 128D 129L 155S 156A 157K (identity: 82.6 %/40.8 %) | |
| 9 | i | I 1 (B) | non-polymer(MG) | MAGNESIUM ION | 22T 40T (identity: 100.0 %/40.8 %) | |
| ALIGNMENTS |
| MODEL[2] Protein A "queryA" TEMPLATE:2y8e_B_1 identity=40.8% |
queryA 9:LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLI: 108
: * ** ****** * * * **** *** * ** * * ********* ** * * * * * * * * * :
2y8e_B_1 15:FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNTNSFHQTSKWIDDVRT: 114
SecStr :EEEEEEESTTSSHHHHHHHHHHS SS SEEEEEEEEEETTEEEEEEEEEE SGGGGGG HHHHHT SEEEEEEETT HHHHHTHHHHHHHHHH:
ExpBur :bebbbbbbeebbbeebbebbbeeeeeeeeeebebbeeeeeeeebeeeebebbbbbbbbeeebeeebeeebeebebbbbbbbbbeeebbeebebbbebbee:
Contact : hhhhhhhh a ahhh h hha aaaaaa a hh
Contact : i i
queryA 109:QASPRDPENFPFVVLGNKIDL-ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIA: 170
: *** ** *** * * ***** ** * * *:
2y8e_B_1 115:ERGS----DVIIMLVGNKTDLSDKRQVSTEEGERKA-KELNVMFIETSAKAGYNVKQLFRRVA: 172
SecStr :HHTT----SSEEEEEEE GGGGGG SS HHHHHHHH-HHHT EEEEE TTT TTHHHHHHHHH:
ExpBur :beee----ebebbbbbbebeeeeeeebeeeebeebb-eeeebeebbbbbeeeebbeebbeebb:
Contact : hh hhf f hhh gg g
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