Protein Model on 2iey assembly_id=3
(TEMPLATE: 
2iey
assembly_id:3
)Protein Model on 2iey assembly_id=3
(TEMPLATE: 2iey
assembly_id:3
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | c(query A) |
| 1 | a | A 1 (A) | polymer(polypeptide(L)) [164 aa] | Ras-related protein Rab-27B :RB27B_MOUSE | 8L 9L(I) 10K 11V(L) 12I(L) 13I(A) 14L 15G 21K 25M(L) 26N(Y) 28Y 29V(T) 31K(N) 33F 34S(N) 35N(P) 36Q(K) 37Y(F) 38K(I) 39A(T) 40T 41I(V) 42G 43A(I) 44D 45F 46L(R) 47T(E) 48K 49E(R) 50V 52V(Y) 57V 58T(H) 59M(L) 60Q 61I(L) 62W 63D 64T 65A 66G 67Q(L) 69R 73L 76A 77F 163E 167Q(E) 174L(U) (identity: 49.0 %/39.2 %) | |
| 2 | b | A 2 (A) | polymer(polypeptide(L)) [164 aa] | Ras-related protein Rab-27B :RB27B_MOUSE | 38K(I) 40T 45F 47T(E) (identity: 50.0 %/39.2 %) | |
| 3 | c | A(RAB7A_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [163 aa] | Ras-related protein Rab-27B :RB27B_MOUSE | |
| 4 | d | B 2 (B) | polymer(polypeptide(L)) [163 aa] | Ras-related protein Rab-27B :RB27B_MOUSE | ||
| 5 | e | C 1 (A) | non-polymer(GDP) | GUANOSINE-5'-DIPHOSPHATE | 65A (identity: 100.0 %/39.2 %) | |
| 6 | f | C 2 (A) | non-polymer(GDP) | GUANOSINE-5'-DIPHOSPHATE | ||
| 7 | g | D 1 (B) | non-polymer(GDP) | GUANOSINE-5'-DIPHOSPHATE | 16D 18G 19V 20G 21K 22T 23S(T) 125N 126K 128D 129L 155S 156A 157K(A) (identity: 85.7 %/39.2 %) | |
| 8 | h | D 2 (B) | non-polymer(GDP) | GUANOSINE-5'-DIPHOSPHATE | ||
| ALIGNMENTS |
| MODEL[3] Protein A "queryA" TEMPLATE:2iey_B_1 identity=39.2% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRL----------VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFK: 97
:* * ********* * ** * * ** * * * * * ***** *** ** ** * * * ** * * :
2iey_B_1 11:LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTXXXXXXXXKAFKVHLQLWDTAGLERFRSLTTAFFRDAUGFLLUFDLTSQQSFL: 110
SecStr : EEEEE TTSSHHHHHHHHSTT EEEEEEEE -------- EEEEEEEE HHHH TTTTTHHHHTTEEEEEEEEETT HHHHH:
ExpBur :eeeeebbbeeebbeeebeeeeeeeeeeeeeeeeeeeeeeeeeeeeee--------eeeeeeeeeeeeebeeeeeeeeeeeeeebebbbbbbbbbeeebbe:
Contact :aaaaaaaag gggagg aa aa a aaaaaaaaaaaaaaaaaa a aaaaaaaaaaaaa a a aa
Contact : g b b b b e
queryA 98:TLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQ: 176
: * * * *** ** * * ******** *** * * :
2iey_B_1 111:NVRNWUSXXXXXXXXXNPD---IVLIGNKADLPDQREVNERQARELAEKYGIPYFETSAATGQNVEKSVETLLDLIUKR: 186
SecStr :TTTT --------- --- EEEEE TT SSS S HHHHHHHHHHTT EEEE TTTT SHHHHHHHHHHHH :
ExpBur :ebeeeee---------eeb---ebbbbbebeeeeeeebeeeebeebbeeeebebbbbbbeeeeebeebbeebeeebeee:
Contact : gg gg ggg a a a
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