Protein Model on 2bme assembly_id=3
(TEMPLATE: 
2bme
assembly_id:3
)Protein Model on 2bme assembly_id=3
(TEMPLATE: 2bme
assembly_id:3
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | C 1 (C) | polymer(polypeptide(L)) [174 aa] | RAS-RELATED PROTEIN RAB4A :RAB4A_HUMAN | |
| 2 | b | L 1 (C) | non-polymer(GNP) | PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER | 16D(N) 17S(A) 18G 19V(T) 20G 21K 22T(S) 23S(C) 33F 37Y(S) 39A(H) 40T 65A 66G 125N 126K 128D 129L 155S 156A 157K(L) (identity: 61.9 %/39.6 %) | |
| 3 | c | M 1 (C) | non-polymer(TRS) | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | 127I(K) 136T(F) 152F(L) 153E 161N (identity: 40.0 %/39.6 %) | |
| 4 | d | N 1 (C) | non-polymer(BME) | BETA-MERCAPTOETHANOL | 67Q 68E 69R (identity: 100.0 %/39.6 %) | |
| 5 | e | O 1 (C) | non-polymer(MG) | MAGNESIUM ION | 22T(S) 40T (identity: 50.0 %/39.6 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:2bme_C_1 identity=39.6% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
:* * * * ** * * *** *** * * * * *********** * **** ** * * * * * *:
2bme_C_1 10:LFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNW----L: 105
SecStr :EEEEEEEESTTSSHHHHHHHHHHSS TT SEEEEEEEEEETTEEEEEEEEEE SGGGHHHHHTT TT SEEEEEEETT HHHHHTHHHH----H:
ExpBur :ebebbbbbbeebbbebbbebbeeeeeeeeeeebebbeebeeebebeeeebebebebbbbeeeebeebeeebeebebbbbbbbbbeeebbebbeeb----b:
Contact : bbbbbbbb b b bb bbddd
Contact : e e
queryA 108:IQASPRDPENFPFVVLGNKIDLE-NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQ: 176
: * * *** ** * * * * **** *** ** ** * :
2bme_C_1 106:TDARMLASQNIVIILCGNKKDLDADREVTFLEASRFA-QENELMFLETSALTGENVEEAFVQCARKILNK: 174
SecStr :HHHHHHT TT EEEEEEE GGGGGG S HHHHHHHH-HHTT EEEE TTT TTHHHHHHHHHHHHHHH:
ExpBur :ebbeeebeeebbbbbbbbebeeeeeeebeeeebeebb-eeeebebbbbbbeeeeebeebbbbbbeebbee:
Contact : bbcbb c cc bbb c
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