Protein Model on 6y7g assembly_id=2
(TEMPLATE: 
6y7g
assembly_id:2
)Protein Model on 6y7g assembly_id=2
(TEMPLATE: 6y7g
assembly_id:2
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
|
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [165 aa] | Ras-related protein Rab-3C :RAB3C_HUMAN | |
| 2 | b | F 1 (B) | non-polymer(GDP) | GUANOSINE-5'-DIPHOSPHATE | 17S 18G(S) 19V 20G 21K 22T 23S 33F 125N 126K 128D 129L(M) 155S 156A 157K (identity: 86.7 %/36.7 %) | |
| 3 | c | G 1 (B) | non-polymer(BTB) | 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | 128D 129L(M) 130E 131N(D) (identity: 50.0 %/36.7 %) | |
| 4 | d | H 1 (B) | non-polymer(MG) | MAGNESIUM ION | 22T 63D (identity: 100.0 %/36.7 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:6y7g_B_1 identity=36.7% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
: * * * * ***** * * * ** * * ********** * **** * * * * * :
6y7g_B_1 30:MFKLLIIGNSSVGKTSFLFRYADDSFTXXXXXXXGIDFKVKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWS----: 125
SecStr :EEEEEEE STTSSHHHHHHHHHH ------- EEEEEEEETTEEEEEEEE S HHHHHHHHHHHT EEEEEEETT HHHHHTHHHHH----:
ExpBur :ebebbbbbbeebbbeebbebbeeeeee-------eeeeeeeebebeeeebebbbbbbeeeeeeebbbebeeeebbbbbbbbbbeeeebbebbeebb----:
Contact : bbbbbbb b d
Contact : d
queryA 108:IQASPRDPENFPFVVLGNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIA: 170
: * * *** * * * * * * ****** *** * * :
6y7g_B_1 126:TQIKTYSWDNAQVILVGNKCDMEDERVISTERGQH-LGEQLGFEFFETSAKDNINVKQTFERLV: 188
SecStr :HHHHHS TT EEEEEEE TT TT S HHHHHH-HHHHHT EEEE BTTTTBSHHHHHHHHH:
ExpBur :ebbeeeeeebbebbbbbbebeeeeeeebeeeebee-bbeebebebebbbbeeeeebeebbeebb:
Contact : bb bbccc bbb
Contact : cc
|
[help]