Protein Model on 5z2m assembly_id=2 (TEMPLATE: 5z2m assembly_id:2 )

CurrentView:JAVA Change to:[HTML5] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(RAB7A_HUMAN) C 1 (C) polymer(polypeptide(L)) [168 aa] Ras-related protein Rab-7a :RAB7A_MOUSE
2 b D 1 (D) polymer(polypeptide(L)) [136 aa] Oxysterol-binding protein-related protein 1 :OSBL1_MOUSE 94N 96F 97K 98T 138R 141A 142W (identity: 100.0 %/97.7 %)
3 c G 1 (C) non-polymer(GTP) GUANOSINE-5'-TRIPHOSPHATE 16D 17S 18G 19V 20G 21K 22T 23S 33F 34S 35N 36Q 39A 63D 64T 66G 68E 125N 126K 128D 129L 155S 156A 157K (identity: 100.0 %/97.7 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:5z2m_C_1 identity=97.7%
queryA         5:KKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRD: 104
                :***********************************   ************************ *************************************:
5z2m_C_1       5:KKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKAXXXADFLTKEVMVDDRLVTMQIWDTAGLERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRD: 104
SecStr          :  EEEEEEEE STTSSHHHHHHHHHHS   SS   ---  EEEEEEE SS EEEEEEE  TTGGGTS   HHHHTT SEEEEEEETT HHHHHTHHHHHH:    
ExpBur          :eeeebbbbbbbeeebbbbebbbbbbeeeeeeeeee---eeeeeeebebeeeebbbbbbbbebebeeeebeeebbeebebbbbbbbbbeeebbeebeebbe:    
Contact         :           cccccccc         cccc  c                       cc c c                         b bbb      

queryA       105:EFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALK: 175
                :***********************************************************************:
5z2m_C_1     105:EFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALK: 175
SecStr          :HHHHHH  S GGG  EEEEEE TTSS   S HHHHHHHHHHTTS  EEEEBTTTTBSHHHHHHHHHHHHH :    
ExpBur          :ebbeebeeeeeeebebbbbbbeebeeeeebeeeebeebbeeeeebebbbbbbeeeeebeebbebbbebbbe:    
Contact         :                    cc cc        b  bb            ccc                                               


Input Residue Numbers for Focused Sites

ex) 2,15,123