Protein Model on 2il1 assembly_id=2
(TEMPLATE: 
2il1
assembly_id:2
)Protein Model on 2il1 assembly_id=2
(TEMPLATE: 2il1
assembly_id:2
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [163 aa] | Rab12 :RAB43_HUMAN | |
| 2 | b | A 2 (A) | polymer(polypeptide(L)) [163 aa] | Rab12 :RAB43_HUMAN | 51M(E) 52V(L) 53D(R) 128D 158E(D) 159A(N) 160I(F) 161N 163E(D) 164Q(E) 167Q(L) (identity: 18.2 %/37.2 %) | |
| 3 | c | B 1 (A) | non-polymer(MG) | MAGNESIUM ION | 22T (identity: 100.0 %/37.2 %) | |
| 4 | d | B 2 (A) | non-polymer(MG) | MAGNESIUM ION | ||
| 5 | e | C 1 (A) | non-polymer(CA) | CALCIUM ION | 163E(D) 164Q(E) (identity: 0.0 %/37.2 %) | |
| 6 | f | C 2 (A) | non-polymer(CA) | CALCIUM ION | 163E(D) 164Q(E) (identity: 0.0 %/37.2 %) | |
| 7 | g | D 1 (A) | non-polymer(GDP) | GUANOSINE-5'-DIPHOSPHATE | 16D(S) 17S(R) 18G 19V 20G 21K 22T 23S 125N 126K 128D 129L(C) 155S 156A 157K (identity: 80.0 %/37.2 %) | |
| 8 | h | D 2 (A) | non-polymer(GDP) | GUANOSINE-5'-DIPHOSPHATE | ||
| 9 | i | E 1 (A) | non-polymer(UNX) | UNKNOWN ATOM OR ION | 152F(C) 161N 164Q(E) (identity: 33.3 %/37.2 %) | |
| 10 | j | E 2 (A) | non-polymer(UNX) | UNKNOWN ATOM OR ION | ||
| 11 | k | F 1 (A) | non-polymer(UNX) | UNKNOWN ATOM OR ION | 145S(Q) (identity: 0.0 %/37.2 %) | |
| 12 | l | F 2 (A) | non-polymer(UNX) | UNKNOWN ATOM OR ION | ||
| 13 | m | G 1 (A) | non-polymer(UNX) | UNKNOWN ATOM OR ION | 128D 158E(D) (identity: 50.0 %/37.2 %) | |
| 14 | n | G 2 (A) | non-polymer(UNX) | UNKNOWN ATOM OR ION | ||
| 15 | o | H 1 (A) | non-polymer(UNX) | UNKNOWN ATOM OR ION | 129L(C) (identity: 0.0 %/37.2 %) | |
| 16 | p | H 2 (A) | non-polymer(UNX) | UNKNOWN ATOM OR ION | ||
| 17 | q | I 1 (A) | non-polymer(UNX) | UNKNOWN ATOM OR ION | 104D(K) 107L(D) (identity: 0.0 %/37.2 %) | |
| 18 | r | I 2 (A) | non-polymer(UNX) | UNKNOWN ATOM OR ION | ||
| 19 | s | J 1 (A) | non-polymer(UNX) | UNKNOWN ATOM OR ION | 128D 129L(C) 130E (identity: 66.7 %/37.2 %) | |
| 20 | t | J 2 (A) | non-polymer(UNX) | UNKNOWN ATOM OR ION | ||
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:2il1_A_1 identity=37.2% |
queryA 9:LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLI: 108
:* *** * ******** * * ** * * *********** * * ** * ** * * ** * * :
2il1_A_1 27:LQVIIIGSRGVGKTSLMERFTDXXXXXXXXSTVGVDFKIKTVELRGKKIRLQIWDTAGQERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDK: 126
SecStr :EEEEEE STTSSHHHHHHHH -------- TTEEEEEEEEEETTEEEEEEEEEE SGGGHHHHHHHHHH SEEEEEEETT HHHHHTHHHHHHHHHH:
ExpBur :bebbbbbbeebbbeebbeebbe--------eeeebeeeeeebebeebebebbbbbbbbeeeebeebbeebeebebbbbbbbbbeeebbeebeebbebbee:
Contact : ggggggcg bbb q q
Contact : g
queryA 109:QASPRDPENFPFVVLGNKIDLE-NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQ: 176
: ** * *** * * * * *** ** * ** :
2il1_A_1 127:YAS----EDAELLLVGNKLDCETDREITRQQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKK: 191
SecStr :HS ----TT EEEEEEE GGGGGG S HHHHHHHHHTSTT EEEE BTTTTBSHHHHHHHHHHHHHHT:
ExpBur :ebe----eebebbbbbbeeeeeeeeebeeeebeebbeeeeebebbbbbbeeeeebeebbeebbbbbbee:
Contact : gg bgss k i gggbbbb bb b
Contact : go m i ee
Contact : ms ff
Contact : s i
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