Protein Model on 8jqu assembly_id=1
(TEMPLATE: 
8jqu
assembly_id:1
)Protein Model on 8jqu assembly_id=1
(TEMPLATE: 8jqu
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [164 aa] | Rab5a :A0A109NYM0_LEIDO | |
| 2 | b | B 1 (A) | non-polymer(EDO) | 1,2-ETHANEDIOL | 158E(D) 160I(N) (identity: 0.0 %/40.1 %) | |
| 3 | c | C 1 (A) | non-polymer(GNP) | PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER | 16D(E) 17S 18G 19V(A) 20G 21K 22T(S) 23S 33F 34S(L) 35N(A) 37Y(Q) 39A(T) 40T 65A 66G 125N 126K 128D 129L 155S 156A 157K (identity: 69.6 %/40.1 %) | |
| 4 | d | D 1 (A) | non-polymer(MG) | MAGNESIUM ION | 22T(S) 40T (identity: 50.0 %/40.1 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:8jqu_A_1 identity=40.1% |
queryA 10:KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQ: 109
:* ** ** ** * * **** ** * ** * * ****** *** ** **** * * * * * * :
8jqu_A_1 15:KIVMLGESGAGKSSIALRFTRNEFLANQETTIGAAFLSKTVMIDGRALKYEIWDTAGLERFRSLAPIYYRGASGALVVYDITNSESLKKAQTWIKELRAN: 114
SecStr :EEEEE TTSSHHHHHHHHHH TT SS EEEEEEEESSSSEEEEEEEE SGGGGGGHHHHHTT SEEEEEEETT HHHHHHHHHHHHHHHHH:
ExpBur :bbbbbbbeebbbbbbbbbbbeeeeeeeeeebeebeebeeebeeeeeebebebebbbbeeebbeebeeebeebebbbbbbbbbeeebbeebeebbebbeee:
Contact : cccccccc ccc c cc cc
Contact : d d
queryA 110:ASPRDPENFPFVVLGNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIA: 170
:* * * *** ** *** * * *** **** * *:
8jqu_A_1 115:ADP----SLIIVLVGNKKDLGSLRQVSFEDGQRLAAEEQLAAFYEASAKDNNNVEQVFLDLA: 172
SecStr :S T----T EEEEEEE TT GGG S HHHHHHHHHHTT SEEEE BTTTTBSHHHHHHHHH:
ExpBur :bee----ebebbbbbbebeeeeeeebeeeebeebbeebebebbebbbbeeeeebeebbeebb:
Contact : cc cc cccb b
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