Protein Model on 8ij9 assembly_id=1
(TEMPLATE: 
8ij9
assembly_id:1
)Protein Model on 8ij9 assembly_id=1
(TEMPLATE: 8ij9
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [168 aa] | Ras-related protein Rab-6B :RAB6B_MOUSE | |
| 2 | b | C 1 (C) | polymer(polypeptide(L)) [71 aa] | ELKS/Rab6-interacting/CAST family member 1 :RB6I2_RAT | 10K 41I 43A(I) 44D 45F 47T(S) 49E(T) 51M(Y) 58T(R) 60Q 62W 69R 70F 73L 76A(S) 77F(Y) 79R 80G(D) (identity: 55.6 %/38.2 %) | |
| 3 | c | E 1 (A) | non-polymer(GTP) | GUANOSINE-5'-TRIPHOSPHATE | 17S(Q) 18G(S) 19V 20G 21K 22T 23S 33F 34S(D) 35N 37Y 38K(Q) 39A 40T 65A 66G 125N 126K 128D 129L 155S 156A 157K (identity: 82.6 %/38.2 %) | |
| 4 | d | F 1 (A) | non-polymer(MG) | MAGNESIUM ION | 22T 40T (identity: 100.0 %/38.2 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:8ij9_A_1 identity=38.2% |
queryA 9:LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLI: 108
: * ** ****** * * * **** *** * ** * * ***** *** ** * * * * * * * * * :
8ij9_A_1 11:FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGLERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRT: 110
SecStr :EEEEEE STTSSHHHHHHHHHHS SS SEEEEEEEEEETTEEEEEEEEEE SGGGGGGHHHHHHT SEEEEEEETT HHHHHTHHHHHHHHHH:
ExpBur :bbbbbbbbeebbbeebbbbbbeeeeeeeeeebebbeebeeebebeeebbebbbebbbbeeebeeebeeebeebebbbbbbbbbeeebbeebeebbeebee:
Contact : b ccccccc ccc ccccb bbb b b b b b b cc bb b bb bb
Contact : d d
queryA 109:QASPRDPENFPFVVLGNKIDL-ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIA: 170
: *** ** ** ***** ** * * *:
8ij9_A_1 111:ERGS----DVIIMLVGNKTDLADKRQITIEEGEQRA-KELSVMFIETSAKTGYNVKQLFRRVA: 168
SecStr :HHTT----SSEEEEEEE TT GGG S HHHHHHHH-HHTT EEEE TTT TTHHHHHHHHH:
ExpBur :eeee----ebebbbbbbebeeeeeeebeeeebeebb-eeeebebbbbbbeeeeebeebbeebb:
Contact : cc cc ccc
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